RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DEFB1P60022 68 aa12.74□□□□□ -0.37
VARS2-212ENST00000542001 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
VARS2-212ENST00000542001 FCN3O75636 299 aa12.74□□□□□ -0.37
VARS2-212ENST00000542001 ASIPP42127 132 aa12.74□□□□□ -0.37
VARS2-212ENST00000542001 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 IGHV3-73A0A0B4J1V6 119 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 APOMO95445 188 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 FABP2P12104 132 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 SIGLEC15Q6ZMC9 328 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
VARS2-212ENST00000542001 OR11H12B2RN74 326 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 OR11H1Q8NG94 326 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 OVOL3O00110 214 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 COX6B1P14854 86 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 RAB9AP51151 201 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 PLP1P60201 277 aa12.73□□□□□ -0.37
VARS2-212ENST00000542001 IGHV1-24A0A0C4DH33 117 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 Q6AWC8 147 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 LINC00311Q8N616 119 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 MSRB1Q9NZV6 116 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
VARS2-212ENST00000542001 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
VARS2-212ENST00000542001 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 SPOCK3Q9BQ16 436 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 MSRB2Q9Y3D2 182 aa12.72□□□□□ -0.37
VARS2-212ENST00000542001 EIF4EBP1Q13541 118 aaPredicted RBP12.71□□□□□ -0.37
VARS2-212ENST00000542001 NRGNQ92686 78 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 CHCHD1Q96BP2 118 aaKnown RBP12.71□□□□□ -0.37
VARS2-212ENST00000542001 NCOR1P1Q9H4R4 102 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 CFAP47Q6ZTR5 3102 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 F6UB75 175 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
VARS2-212ENST00000542001 PET117Q6UWS5 81 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 NPFFR1Q9GZQ6 430 aa12.71□□□□□ -0.37
VARS2-212ENST00000542001 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.37
VARS2-212ENST00000542001 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.38
VARS2-212ENST00000542001 TMEM158Q8WZ71 300 aa12.71□□□□□ -0.38
VARS2-212ENST00000542001 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.38
VARS2-212ENST00000542001 BCL6BQ8N143 479 aaPredicted RBP12.7□□□□□ -0.38
VARS2-212ENST00000542001 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 YPEL4Q96NS1 127 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 J3QR89 54 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 K7EIM0 57 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
VARS2-212ENST00000542001 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 A0A087WWL8 130 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 IGLV2-23P01705 113 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 THAP8Q8NA92 274 aa12.7□□□□□ -0.38
VARS2-212ENST00000542001 ITLN2Q8WWU7 325 aaPredicted RBP12.7□□□□□ -0.38
VARS2-212ENST00000542001 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 HERVK_113P61574 105 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 PRR25Q96S07 402 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 SLC50A1Q9BRV3 221 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.69□□□□□ -0.38
VARS2-212ENST00000542001 M0R1W7 72 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
VARS2-212ENST00000542001 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
VARS2-212ENST00000542001 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 DOPEY1Q5JWR5 2465 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 IGKV1D-37A0A075B6S9 117 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 NPYP01303 97 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 RNF5Q99942 180 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
VARS2-212ENST00000542001 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
VARS2-212ENST00000542001 PRSS46E5RG02 174 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 GP9P14770 177 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
VARS2-212ENST00000542001 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 MRPL51Q4U2R6 128 aaKnown RBP12.67□□□□□ -0.38
VARS2-212ENST00000542001 MTURNQ8N3F0 131 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 A0A0U1RRA0 63 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 C3orf36Q3SXR2 165 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 IGLV1-47P01700 117 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 MEGF9Q9H1U4 602 aa12.67□□□□□ -0.38
VARS2-212ENST00000542001 EGR2P11161 476 aaPredicted RBP12.66□□□□□ -0.38
VARS2-212ENST00000542001 MINOS1Q5TGZ0 78 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 DYNAPQ8N1N2 210 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 MINOS1-NBL1R4GNA1 71 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 A0A0G2JLM5 398 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 H3BRN7 92 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 SMIM13P0DJ93 91 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 ZFP36P26651 326 aaKnown RBP12.66□□□□□ -0.38
VARS2-212ENST00000542001 RASL11AQ6T310 242 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 IGF2BP2-AS1Q96M15 143 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 I3L2K1 104 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
VARS2-212ENST00000542001 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
VARS2-212ENST00000542001 CR1LQ2VPA4 569 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 512.9 ms