RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 IZUMO1RA6ND01 250 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 LHFPL1Q86WI0 220 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 MGST2Q99735 147 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 TP53BP1Q12888 1972 aaPredicted RBP6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 DENND4AQ7Z401 1863 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 HIST1H4GQ99525 98 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 IGKV1-6A0A0C4DH72 117 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 MRPL23Q16540 153 aaKnown RBP6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 TMEM136Q6ZRR5 245 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 NDUFAF3Q9BU61 184 aa6.78□□□□□ -1.32
FNDC3A-206ENST00000541916 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 ESM1Q9NQ30 184 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 SPXQ9BT56 116 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 WIPF3A6NGB9 483 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 CACNA1DQ01668 2161 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 A8MWV9 139 aa6.77□□□□□ -1.33
FNDC3A-206ENST00000541916 CCL20P78556 96 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 PDE6HQ13956 83 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 MRPL16Q9NX20 251 aaKnown RBP6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 MED13Q9UHV7 2174 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 WT1-ASQ06250 92 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 PMCHL1Q16048 86 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 OXLD1Q5BKU9 147 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 TM2D2Q9BX73 214 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 CARHSP1Q9Y2V2 147 aaKnown RBP6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 RHOHQ15669 191 aa6.76□□□□□ -1.33
FNDC3A-206ENST00000541916 SH2D1AO60880 128 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 NDUFA7O95182 113 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 TCRAP04437 139 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 HOXA5P20719 270 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 C14orf178Q8N769 122 aaPredicted RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 CYSLTR1Q9Y271 337 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 COL5A1P20908 1838 aaPredicted RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 LRRK1Q38SD2 2015 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 ZNRF2Q8NHG8 242 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 SLC25A20O43772 301 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 NDUFA3O95167 84 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 ADMP35318 185 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 SH2D6Q7Z4S9 175 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 A6NJY4 79 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 GAGE6Q13070 117 aa6.75□□□□□ -1.33
FNDC3A-206ENST00000541916 KRTAP27-1Q3LI81 207 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 LINC00469Q8N7U9 141 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 MALRD1Q5VYJ5 2156 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 ATRXP46100 2492 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 LOC107984156A0A0G2JMH3 177 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 CIDEAO60543 219 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 LINC00158P58513 81 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 GPHB5Q86YW7 130 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 ZNF414Q96IQ9 312 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 U3KQE9 123 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 A0A0G2JRQ6 117 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 ZNF493Q6ZR52 646 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 RITA1Q96K30 269 aa6.74□□□□□ -1.33
FNDC3A-206ENST00000541916 IGHV3-30P01768 117 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 IGHV3-33P01772 117 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 IGHV3-30-3P0DP02 117 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 IGHV3-30-5P0DP03 117 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 SRSF1Q07955 248 aaKnown RBP eCLIP6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 OCC1Q8TAD7 63 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 FNDC10F2Z333 226 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 F6UB75 175 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 H3BMM0 161 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 IGHG4P01861 327 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 HIST2H2BDQ6DRA6 164 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 UBE2WQ96B02 151 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 SMIM12Q96EX1 92 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 PYGO2Q9BRQ0 406 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 UBE2BP63146 152 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 FAM19A2Q8N3H0 131 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 CYTL1Q9NRR1 136 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 A0A087WWC5 75 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
FNDC3A-206ENST00000541916 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms