RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PRR25Q96S07 402 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 ASXL3Q9C0F0 2248 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 LRRC37AA6NMS7 1700 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 TIMM17AQ99595 171 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 COL11A2P13942 1736 aaPredicted RBP8.56□□□□□ -1.04
GABRB3-204ENST00000541819 FOXL2NBQ6ZUU3 175 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 ZNF236Q9UL36 1845 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 LMO1P25800 156 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 CEND1Q8N111 149 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
GABRB3-204ENST00000541819 PARP14Q460N5 1801 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 J3QQQ9 107 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 CITED1Q99966 193 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
GABRB3-204ENST00000541819 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 IGLV2-23P01705 113 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 UBE2AP49459 152 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 PYGO2Q9BRQ0 406 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 MRPL36Q9P0J6 103 aaKnown RBP8.55□□□□□ -1.04
GABRB3-204ENST00000541819 HLA-DMBP28068 263 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 HERV-K104P63124 156 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 U3KQE9 123 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 LGALS9BQ3B8N2 356 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 LGALS9CQ6DKI2 356 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
GABRB3-204ENST00000541819 CCL24O00175 119 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 IGHG2P01859 326 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 QRFPP83859 136 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 C15orf53Q8NAA6 179 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 LYL1P12980 280 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 WFDC9Q8NEX5 89 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 NCOR1P1Q9H4R4 102 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 VPREB3Q9UKI3 123 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 MP68P56378 58 aa8.54□□□□□ -1.04
GABRB3-204ENST00000541819 FAM120AOSQ5T036 256 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 CKAP5Q14008 2032 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 CRYBA4P53673 196 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 LINC00311Q8N616 119 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 C16orf74Q96GX8 76 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 ZNF581Q9P0T4 197 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 F8VRH5 84 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 MRPL23Q16540 153 aaKnown RBP8.53□□□□□ -1.04
GABRB3-204ENST00000541819 SEC61GP60059 68 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 RP1L1Q8IWN7 2480 aaPredicted RBP8.53□□□□□ -1.04
GABRB3-204ENST00000541819 IGHV4-28A0A0C4DH34 117 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
GABRB3-204ENST00000541819 Q6ZRM9 215 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 PIFOQ8TCI5 191 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 VOPP1Q96AW1 172 aa8.53□□□□□ -1.04
GABRB3-204ENST00000541819 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
GABRB3-204ENST00000541819 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.04
GABRB3-204ENST00000541819 F8W735 103 aaPredicted RBP8.52□□□□□ -1.04
GABRB3-204ENST00000541819 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.04
GABRB3-204ENST00000541819 K7EP34 96 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 SIGLEC8Q9NYZ4 499 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 C17orf58Q2M2W7 97 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
GABRB3-204ENST00000541819 H3BQ85 93 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGHV3-30P01768 117 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGHV3-33P01772 117 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGHV3-30-3P0DP02 117 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 IGHV3-30-5P0DP03 117 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
GABRB3-204ENST00000541819 Q9H8V8 135 aa8.52□□□□□ -1.05
GABRB3-204ENST00000541819 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
GABRB3-204ENST00000541819 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 F6UB75 175 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 ATP5G1P05496 136 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 BAALC-AS2P0C853 105 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 COX8AP10176 69 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 GP9P14770 177 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 MDC1Q14676 2089 aaKnown RBP8.51□□□□□ -1.05
GABRB3-204ENST00000541819 PSME4Q14997 1843 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 FAM231DQ6ZW35 169 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 C8orf31Q8N9H6 132 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 SCN2AQ99250 2005 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 NPYP01303 97 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 IGFL3Q6UXB1 125 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 TAF1LQ8IZX4 1826 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
GABRB3-204ENST00000541819 TPRP12270 2363 aaKnown RBP8.5□□□□□ -1.05
GABRB3-204ENST00000541819 K7EQD1 137 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 GYPEP15421 78 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 DEFB112Q30KQ8 113 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 PYY3Q5JQD4 70 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 ZC2HC1AQ96GY0 325 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-204ENST00000541819 TM2D2Q9BX73 214 aa8.5□□□□□ -1.05
GABRB3-204ENST00000541819 A0A1B0GX51 115 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms