RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ANK2Q01484 3957 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 A0A087WX48 190 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 TCRBV3S1A0A5B6 114 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 TMEM189A5PLL7 270 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 MAP1LC3B2A6NCE7 125 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 IGLL5B9A064 214 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 FABP4P15090 132 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 NFYAP23511 347 aaPredicted RBP2.55□□□□□ -2
SNHG1-217ENST00000541578 S100A10P60903 97 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 DAD1P61803 113 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 FMODQ06828 376 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 EIF4EBP1Q13541 118 aaPredicted RBP2.55□□□□□ -2
SNHG1-217ENST00000541578 OR2F1Q13607 317 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 NCBP2-AS2Q69YL0 99 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 ZFAND6Q6FIF0 208 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 TBPL2Q6SJ96 375 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 GTF2H5Q6ZYL4 71 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 FAM19A5Q7Z5A7 132 aaPredicted RBP2.55□□□□□ -2
SNHG1-217ENST00000541578 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 OR8I2Q8N0Y5 310 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 RPRMLQ8N4K4 120 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 MORN4Q8NDC4 146 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 APOBEC3DQ96AK3 386 aaPredicted RBP2.55□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BLQ99880 126 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 HSPB9Q9BQS6 159 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 DOHHQ9BU89 302 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 EFCAB11Q9BUY7 163 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 SCRT1Q9BWW7 348 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 PECRQ9BY49 303 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 MAP1LC3BQ9GZQ8 125 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 LINC00574Q9H8X3 128 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 KIAA1549Q9HCM3 1950 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 BET1LQ9NYM9 111 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 NAT8BQ9UHF3 227 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 TPRKBQ9Y3C4 175 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 V9GYH0 126 aa2.55□□□□□ -2
SNHG1-217ENST00000541578 IGLV2-18A0A075B6J9 118 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 hCG_1818297A0A087WSY0 165 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 A0A1W2PRE2 83 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 A0A1W2PRS3 328 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 MCRIP1C9JLW8 97 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 APOC4-APOC2K7ER74 178 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ISLRO14498 428 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 HMGB3O15347 200 aaKnown RBP2.54□□□□□ -2
SNHG1-217ENST00000541578 PLA2G10O15496 165 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 LYRM1O43325 122 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 SIX6O95475 246 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 APOC2P02655 101 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 C1QAP02745 245 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 CD14P08571 375 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 OR4A8P0C604 315 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ADCYAP1P18509 176 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ORM2P19652 201 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ATP6V0CP27449 155 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 GABRA3P34903 492 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 SRP14P37108 136 aaKnown RBP2.54□□□□□ -2
SNHG1-217ENST00000541578 H2BFSP57053 126 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 SLC35A2P78381 396 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 HSD52Q0P140 79 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 PRDX4Q13162 271 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 PPP1R1AQ13522 171 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 HIST3H3Q16695 136 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 CCSMST1Q4G0I0 132 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 TRMT12Q53H54 448 aaKnown RBP2.54□□□□□ -2
SNHG1-217ENST00000541578 OR10K2Q6IF99 312 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ALKAL2Q6UX46 152 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 HEPN1Q6WQI6 88 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ZNRF2Q8NHG8 242 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 TMEM106AQ96A25 262 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 SHANK2-AS3Q9BTD1 123 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 OR51I1Q9H343 314 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ENY2Q9NPA8 101 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 UQCC1Q9NVA1 299 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 ZNF586Q9NXT0 402 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 TAS2R8Q9NYW2 309 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 LINC00527Q9UJ94 153 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 MRPS16Q9Y3D3 137 aaKnown RBP2.54□□□□□ -2
SNHG1-217ENST00000541578 MEGF8Q7Z7M0 2845 aa2.54□□□□□ -2
SNHG1-217ENST00000541578 A0A087WUU8 490 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 IGHV3-43A0A0B4J1X8 118 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 A0A0D9SG52 128 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 IGHV1-69-2A0A0G2JMI3 117 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 A0A0G2JMM0 328 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 TEX50A0A1B0GTY4 177 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 A0A1B0GX51 115 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 A0A1W2PPB8 328 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 FAM159BA6NKW6 160 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 KIR3DP1A8MWS1 328 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 TMEM250H0YL14 139 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BKO60814 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR7C1O76099 320 aaPredicted RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 APOA2P02652 100 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 CSN2P05814 226 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BJP06899 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 CRYGDP07320 174 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR12D1P0DN82 309 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 EVI2AP22794 236 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BOP23527 126 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms