RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 C7orf69Q9H7B7 122 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 ASCC3Q8N3C0 2202 aaKnown RBP4.31□□□□□ -1.72
PTPRD-213ENST00000537002 TNRC6BQ9UPQ9 1833 aaKnown RBP4.31□□□□□ -1.72
PTPRD-213ENST00000537002 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 PF4V1P10720 104 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-213ENST00000537002 NOTCH4Q99466 2003 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 CR1LQ2VPA4 569 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 FAM167A-AS1Q96KT0 104 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 TRAV12-1A0A0B4J245 112 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 RHODO00212 210 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 DKK1O94907 266 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 SRSF2Q01130 221 aaKnown RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 Q6ZR03 302 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 PRADC1Q9BSG0 188 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 C10orf142B7Z368 130 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 ACYP1P07311 99 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 TOMM7Q9P0U1 55 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 ZCCHC24Q8N2G6 241 aaKnown RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 CDX4O14627 284 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 CNTFRP26992 372 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 DIDO1Q9BTC0 2240 aaKnown RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 IGKV1D-17A0A075B6S4 117 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 CD7P09564 240 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 C5orf47Q569G3 176 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 ZNF71Q9NQZ8 489 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 EFNA4P52798 201 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 URB1-AS1Q96HZ7 61 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 C11orf68Q9H3H3 251 aaKnown RBP4.3□□□□□ -1.72
PTPRD-213ENST00000537002 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 LRP4O75096 1905 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 CABIN1Q9Y6J0 2220 aa4.3□□□□□ -1.72
PTPRD-213ENST00000537002 NBR2O15453 112 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 FXYD5Q96DB9 178 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RITA1Q96K30 269 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 TRACP01848 142 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 ZNF625Q96I27 306 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 MOB4Q9Y3A3 225 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV1-18A0A0C4DH31 117 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 J3QKU1 62 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 TP53TG1Q9Y2A0 90 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 GDF5OSQ5U4N7 250 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RBMY1BA6NDE4 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RBMY1EA6NEQ0 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RBMY1DP0C7P1 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 PLA2G2CQ5R387 149 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 IL17RELQ6ZVW7 336 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 TRIOBPQ9H2D6 2365 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 RS1O15537 224 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 LY6EQ16553 131 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 WDR86Q86TI4 376 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 ABCA7Q8IZY2 2146 aa4.29□□□□□ -1.72
PTPRD-213ENST00000537002 BPTFQ12830 3046 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 TRAV13-1A0A0B4J241 112 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 SRRM5B3KS81 715 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 TRGV3P03979 118 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 FAM27E3Q08E93 113 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 PHLDA1Q8WV24 401 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-213ENST00000537002 PTH2Q96A98 100 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 Q8TCH9 128 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 TRBV19A0A075B6N1 114 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 COL8A2P25067 703 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 HLA-DMBP28068 263 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 GLRXP35754 106 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 B3GALT5-AS1P59052 145 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 C9orf106Q8NAJ2 232 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 DDB2Q92466 427 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV3-73A0A0B4J1V6 119 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 LGALS1P09382 135 aaKnown RBP4.28□□□□□ -1.72
PTPRD-213ENST00000537002 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 A0A087WWL8 130 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 TIMM23O14925 209 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 C8orf31Q8N9H6 132 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-213ENST00000537002 ZNF503Q96F45 646 aa4.28□□□□□ -1.72
PTPRD-213ENST00000537002 GAFA1Q96PS6 74 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 2508.9 ms