RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 WFDC1Q9HC57 220 aa8.87□□□□□ -0.99
PRKDC-207ENST00000536483 KCNIP2Q9NS61 270 aa8.87□□□□□ -0.99
PRKDC-207ENST00000536483 ZNF586Q9NXT0 402 aa8.87□□□□□ -0.99
PRKDC-207ENST00000536483 DKK2Q9UBU2 259 aa8.87□□□□□ -0.99
PRKDC-207ENST00000536483 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 TRBV19A0A075B6N1 114 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 TMEM218A2RU14 115 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 SLC17A3O00476 420 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 INSP01308 110 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 HBE1P02100 147 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 RAB2AP61019 212 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 RRN3P1Q2M238 152 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 TMEM256Q8N2U0 113 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 FAM167A-AS1Q96KT0 104 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 ODF3Q96PU9 254 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 PSMG3Q9BT73 122 aaPredicted RBP8.86□□□□□ -0.99
PRKDC-207ENST00000536483 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
PRKDC-207ENST00000536483 M0R2N4 97 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 NDUFB4O95168 129 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 P0DMU3 169 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 SERF2P84101 59 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
PRKDC-207ENST00000536483 PEA15Q15121 130 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 C10orf91Q5T1B1 145 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 POM121L12Q8N7R1 296 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 SCGB1C1Q8TD33 95 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 FAM210BQ96KR6 192 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 SEC11CQ9BY50 192 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 MRPL32Q9BYC8 188 aaKnown RBP8.85□□□□□ -0.99
PRKDC-207ENST00000536483 PRELID1Q9Y255 219 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 CARHSP1Q9Y2V2 147 aaKnown RBP8.85□□□□□ -0.99
PRKDC-207ENST00000536483 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 PKD1P98161 4303 aa8.85□□□□□ -0.99
PRKDC-207ENST00000536483 LOC102723971A0A1B0GUV8 181 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 PRSS29PA6NIE9 313 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 M0R2Z0 102 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 RTL8CO15255 209 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 CDKN1BP46527 198 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 TAS2R60P59551 318 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 CLINT1Q14677 625 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 GCSAMLQ5JQS6 135 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 SVBPQ8N300 66 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 OR2G3Q8NGZ4 309 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 NDUFAF3Q9BU61 184 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 SLC25A2Q9BXI2 301 aa8.84□□□□□ -0.99
PRKDC-207ENST00000536483 IGHV3OR16-12A0A075B7B8 117 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 TRAV1-1A0A0B4J248 108 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 C17orf112F2Z3M2 114 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 ATP6V0CP27449 155 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 FAM222AQ5U5X8 452 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 NIPSNAP3BQ9BS92 247 aa8.83□□□□□ -1
PRKDC-207ENST00000536483 YTHDF2Q9Y5A9 579 aaKnown RBP8.83□□□□□ -1
PRKDC-207ENST00000536483 LYRM9A8MSI8 78 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 H3BTX0 84 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 NDUFS6O75380 124 aaKnown RBP8.82□□□□□ -1
PRKDC-207ENST00000536483 MBP02144 154 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
PRKDC-207ENST00000536483 RHOBP62745 196 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 FUT9Q9Y231 359 aa8.82□□□□□ -1
PRKDC-207ENST00000536483 MUC4Q99102 2169 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 H7BYZ3 331 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 SNAPINO95295 136 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 NBEAP1P0C6P0 100 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 CT45A10P0DMU9 189 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 PYYP10082 97 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 EMP1P54849 157 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 LYPD1Q8N2G4 141 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 SUN5Q8TC36 379 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 FXYD5Q96DB9 178 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 LINC00477Q96M19 166 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 OR51M1Q9H341 326 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 TREM1Q9NP99 234 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 PPP1R14DQ9NXH3 145 aa8.81□□□□□ -1
PRKDC-207ENST00000536483 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 TRBV7-9A0A0J9YWB2 115 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
PRKDC-207ENST00000536483 APOC3P02656 99 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 H2AFB1P0C5Y9 115 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 AZU1P20160 251 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 TAGLN2P37802 199 aaKnown RBP8.8□□□□□ -1
PRKDC-207ENST00000536483 LGALS9BQ3B8N2 356 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
PRKDC-207ENST00000536483 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms