RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SZT2Q5T011 3432 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 FREM3P0C091 2139 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 MYLKQ15746 1914 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 MGAMO43451 1857 aa1.01□□□□□ -2.25
PRKDC-205ENST00000535375 ROS1P08922 2347 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 BOD1L1Q8NFC6 3051 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 ALPK3Q96L96 1907 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 TRBV27A0A0K0K1C4 114 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 H3BRM9 83 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 KLF7O75840 302 aaPredicted RBP1□□□□□ -2.25
PRKDC-205ENST00000535375 DNAL4O96015 105 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 IGHV3-33P01772 117 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 FABP2P12104 132 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 RPS3P23396 243 aaKnown RBP eCLIP1□□□□□ -2.25
PRKDC-205ENST00000535375 SDC2P34741 201 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 MIR22HGQ0VDD5 57 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 HAGHLQ6PII5 290 aaPredicted RBP1□□□□□ -2.25
PRKDC-205ENST00000535375 FOXI2Q6ZQN5 318 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 PLPP5Q8NEB5 264 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 CCDC115Q96NT0 180 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 AMELYQ99218 206 aa1□□□□□ -2.25
PRKDC-205ENST00000535375 CCDC168Q8NDH2 2452 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 TCOF1Q13428 1488 aaKnown RBP0.99□□□□□ -2.25
PRKDC-205ENST00000535375 IGLV3-32A0A0A0MS00 114 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 GNG14A0A1W2PPG7 69 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 MT-ND6P03923 174 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 FABP4P15090 132 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 DR1Q01658 176 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 CIRBPQ14011 172 aaKnown RBP0.99□□□□□ -2.25
PRKDC-205ENST00000535375 TAC4Q86UU9 113 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 GKN2Q86XP6 184 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 OR4B1Q8NGF8 309 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 GRPEL2Q8TAA5 225 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 NIT2Q9NQR4 276 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 VCANP13611 3396 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 HYDINQ4G0P3 5121 aa0.99□□□□□ -2.25
PRKDC-205ENST00000535375 RYR3Q15413 4870 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 E9PCH4 1651 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 RPS28P62857 69 aaKnown RBP0.98□□□□□ -2.25
PRKDC-205ENST00000535375 SAMD13Q5VXD3 122 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 LINC00305Q7Z4B0 112 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 OR5H6Q8NGV6 325 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 PRELID3AQ96N28 172 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 OR4C12Q96R67 309 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 LXNQ9BS40 222 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 CST11Q9H112 138 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 TMEM138Q9NPI0 162 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 TNFSF18Q9UNG2 199 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 TPRKBQ9Y3C4 175 aa0.98□□□□□ -2.25
PRKDC-205ENST00000535375 KMT2CQ8NEZ4 4911 aaKnown RBP0.97□□□□□ -2.25
PRKDC-205ENST00000535375 LOC107984640A0A0U1RRK4 108 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 NDUFA6P56556 154 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 ZCCHC23Q6ZST2 131 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 MORN4Q8NDC4 146 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 MRPL40Q9NQ50 206 aaKnown RBP0.97□□□□□ -2.25
PRKDC-205ENST00000535375 TRAPPC2LQ9UL33 140 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 GINS2Q9Y248 185 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 ARAP1Q96P48 1450 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 FAM135BQ49AJ0 1406 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 HEATR1Q9H583 2144 aaKnown RBP0.97□□□□□ -2.25
PRKDC-205ENST00000535375 PDZD2O15018 2839 aa0.97□□□□□ -2.25
PRKDC-205ENST00000535375 UNC13CQ8NB66 2214 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 PEAK1Q9H792 1746 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 TRAV13-1A0A0B4J241 112 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 TSTD3H0UI37 97 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 JMJD7-PLA2G4BH0Y9G9 81 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 H3BMG7 143 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 S100GP29377 79 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 MAXP61244 160 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 DIAPH2-AS1Q14236 149 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 NAT14Q8WUY8 206 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 SKA2Q8WVK7 121 aaPredicted RBP0.96□□□□□ -2.26
PRKDC-205ENST00000535375 CBLN4Q9NTU7 201 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 HSPB8Q9UJY1 196 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 CFAP46Q8IYW2 2715 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 ANKRD31Q8N7Z5 1873 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 MKI67P46013 3256 aaKnown RBP0.96□□□□□ -2.26
PRKDC-205ENST00000535375 ERBINQ96RT1 1412 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 SIP14410 1827 aa0.96□□□□□ -2.26
PRKDC-205ENST00000535375 REV3LO60673 3130 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
PRKDC-205ENST00000535375 A2MP01023 1474 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 PPYP01298 95 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 TRACP01848 142 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 PRB4P10163 310 aaPredicted RBP0.95□□□□□ -2.26
PRKDC-205ENST00000535375 SRP9P49458 86 aaKnown RBP0.95□□□□□ -2.26
PRKDC-205ENST00000535375 EFNA4P52798 201 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 FOXA3P55318 350 aaPredicted RBP0.95□□□□□ -2.26
PRKDC-205ENST00000535375 SBSPONQ8IVN8 264 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 PHRF1Q9P1Y6 1649 aaKnown RBP0.95□□□□□ -2.26
PRKDC-205ENST00000535375 SPG11Q96JI7 2443 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 RYR2Q92736 4967 aa0.95□□□□□ -2.26
PRKDC-205ENST00000535375 DLC1Q96QB1 1528 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 EPPK1P58107 5090 aaKnown RBP0.94□□□□□ -2.26
PRKDC-205ENST00000535375 LRRK2Q5S007 2527 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 PDE4DIPQ5VU43 2346 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 SPEGQ15772 3267 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 A0A0J9YY99 117 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 NCR3O14931 201 aa0.94□□□□□ -2.26
PRKDC-205ENST00000535375 SAA1P0DJI8 122 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms