RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	IGKV2D-40	P01614	121 aa	Predicted RBP	10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	AZU1	P20160	251 aa		10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	CSN1S1	P47710	185 aa		10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	RAB24	Q969Q5	203 aa		10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	FAM19A4	Q96LR4	140 aa		10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	NIPSNAP3B	Q9BS92	247 aa		10.37	□□□□□ -0.75
CTSB-231	ENST00000534382	DEFB131B	A0A096LNP1	70 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	IGLL5	B9A064	214 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	SLC25A5	P05141	298 aa	Known RBP	10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	STAG3L2	P0CL84	134 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	STAG3L3	P0CL85	134 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	HTN1	P15515	57 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	TCTA	P57738	103 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	TMEM78	Q5T7P6	136 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	LINC00476	Q8WZB0	136 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	VGLL1	Q99990	258 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	OTOR	Q9NRC9	128 aa		10.36	□□□□□ -0.75
CTSB-231	ENST00000534382	RBAKDN	A6NC62	111 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	PGP	A6NDG6	321 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	ARL14EPL	P0DKL9	152 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	PLEC	Q15149	4684 aa	Known RBP	10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	FAM74A1	Q5RGS3	127 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	RXFP4	Q8TDU9	374 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	C16orf74	Q96GX8	76 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	CYTL1	Q9NRR1	136 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	PLA2G2E	Q9NZK7	142 aa		10.35	□□□□□ -0.75
CTSB-231	ENST00000534382	TRAV12-3	A0A0B4J271	114 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	PLAC8L1	A1L4L8	177 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	C7orf71	A4D174	169 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	LYRM9	A8MSI8	78 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	KLLN	B2CW77	178 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	LY6G6C	O95867	125 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	NMB	P08949	121 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	CRISP2	P16562	243 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	ZNF138	P52744	262 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	ZNF493	Q6ZR52	646 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	OR11H4	Q8NGC9	324 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	HYLS1	Q96M11	299 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	ZNF492	Q9P255	531 aa		10.34	□□□□□ -0.75
CTSB-231	ENST00000534382	HMSD	A8MTL9	139 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	DIRC3	C9JPN6	131 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	GPX1	P07203	203 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	GCHFR	P30047	84 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	RNASE4	P34096	147 aa	Known RBP	10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	DAD1	P61803	113 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	ZNF345	Q14585	488 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	CCDC28A	Q8IWP9	274 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	KCNRG	Q8N5I3	272 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	ARL6IP6	Q8N6S5	226 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	CMTM2	Q8TAZ6	248 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	RNASE8	Q8TDE3	154 aa	Known RBP	10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	TMEM263	Q8WUH6	116 aa	Known RBP	10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	PYGO2	Q9BRQ0	406 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	APLN	Q9ULZ1	77 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	RYR2	Q92736	4967 aa		10.33	□□□□□ -0.76
CTSB-231	ENST00000534382	LYST	Q99698	3801 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	IGHV4-4	A0A075B6R2	117 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	TRBV7-9	A0A0J9YWB2	115 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	ZNF324	O75467	553 aa	Predicted RBP	10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	CXorf1	O96002	111 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	CD300C	Q08708	224 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	BTN1A1	Q13410	526 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	ZFAND2A	Q8N6M9	145 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	SUN5	Q8TC36	379 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	ARPC5L	Q9BPX5	153 aa		10.32	□□□□□ -0.76
CTSB-231	ENST00000534382	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.32	□□□□□ -0.76
CTSB-231	ENST00000534382		A0A0D9SG52	128 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	AKR1C8P	Q5T2L2	129 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	LGALS9C	Q6DKI2	356 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	SSX7	Q7RTT5	188 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382		Q8TAT8	98 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	TMEM167B	Q9NRX6	74 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	DNAH1	Q9P2D7	4330 aa		10.31	□□□□□ -0.76
CTSB-231	ENST00000534382	ALMS1	Q8TCU4	4167 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	CTXND1	A0A1B0GTU2	59 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	DEFB130B	P0DP73	79 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	DEFB130A	P0DP74	79 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	ZNF726P1	Q15940	193 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	TMED6	Q8WW62	240 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	ST6GAL2	Q96JF0	529 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	LINC00467	Q9BRT7	94 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	NOP10	Q9NPE3	64 aa	Known RBP	10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	RPH3AL	Q9UNE2	315 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	LENEP	Q9Y5L5	61 aa		10.3	□□□□□ -0.76
CTSB-231	ENST00000534382	HTN3	P15516	51 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382	PRR9	Q5T870	116 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382		Q6ZNX1	250 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382	GOLT1A	Q6ZVE7	132 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382	FAM210B	Q96KR6	192 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382	NDUFAF3	Q9BU61	184 aa		10.29	□□□□□ -0.76
CTSB-231	ENST00000534382	KANTR	A0A1W2PQU2	76 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	SNURFL	B1AK76	121 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	SUMO1	P63165	101 aa	Known RBP	10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	GNG5	P63218	68 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	ANXA2R	Q3ZCQ2	193 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	IQCF2	Q8IXL9	164 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	EIF4E3	Q8N5X7	224 aa	Known RBP	10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	C5orf17	Q8NAS9	161 aa		10.28	□□□□□ -0.76
CTSB-231	ENST00000534382	SERTM2	A0A1B0GWG4	89 aa		10.27	□□□□□ -0.77

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