RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
SSSCA1-206ENST00000531405 VPS13BQ7Z7G8 4022 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 SPINK4O60575 86 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 NXPH4O95158 308 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 IGHV3-53P01767 116 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 IL7P13232 177 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 VWC2Q2TAL6 325 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 Q6ZQT7 251 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 EXOC3-AS1Q8N2X6 119 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 BLNKQ8WV28 456 aa12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 DMBT1Q9UGM3 2413 aaPredicted RBP12.6□□□□□ -0.39
SSSCA1-206ENST00000531405 C5orf51A6NDU8 294 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 PAX4O43316 350 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 RPL29P47914 159 aaKnown RBP12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 TCL1AP56279 114 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 PRR9Q5T870 116 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 LINC00467Q9BRT7 94 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 TIMM9Q9Y5J7 89 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 ICOSQ9Y6W8 199 aa12.59□□□□□ -0.39
SSSCA1-206ENST00000531405 TRAV6A0A075B6T7 132 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 EPM2AB3EWF7 344 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 MPDU1O75352 247 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 GPX1P07203 203 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 ST6GAL2Q96JF0 529 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 SEC22CQ9BRL7 303 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.4
SSSCA1-206ENST00000531405 PLA2G10O15496 165 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 FGF7P21781 194 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 S100A10P60903 97 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 C12orf45Q8N5I9 185 aaPredicted RBP12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 VGLL1Q99990 258 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 PRELID1Q9Y255 219 aa12.57□□□□□ -0.4
SSSCA1-206ENST00000531405 RGS13O14921 159 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 DNAH10OSP0CZ25 163 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 CRISP2P16562 243 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 SULT1A1P50225 295 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 ERVFC1-1P60608 527 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 ICAM4Q14773 271 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 C2orf50Q96LR7 162 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 LYRM2Q9NU23 88 aaPredicted RBP12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 SRRM2Q9UQ35 2752 aaKnown RBP12.56□□□□□ -0.4
SSSCA1-206ENST00000531405 PVALBP20472 110 aaPredicted RBP12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 S100A11P31949 105 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 XGP55808 180 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 PDE6HQ13956 83 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 IBA57Q5T440 356 aaKnown RBP12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 PRO0255Q9UI72 69 aa12.55□□□□□ -0.4
SSSCA1-206ENST00000531405 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 EREGO14944 169 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 LYRM1O43325 122 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 PRAF2O60831 178 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 TCRBP04435 133 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 CRYBA4P53673 196 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 RAB32Q13637 225 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 FHL2Q14192 279 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 TMEM78Q5T7P6 136 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 LYPD5Q6UWN5 251 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 STX12Q86Y82 276 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 LYPD1Q8N2G4 141 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 HHLA3Q9XRX5 114 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 MYCBP2O75592 4640 aa12.54□□□□□ -0.4
SSSCA1-206ENST00000531405 HBG1P69891 147 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 HBG2P69892 147 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 Q8TAT8 98 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 ARPC5LQ9BPX5 153 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 NPCDR1Q9BY65 106 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
SSSCA1-206ENST00000531405 NMBP08949 121 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 KRTAP10-1P60331 282 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 ZNF492Q9P255 531 aa12.52□□□□□ -0.41
SSSCA1-206ENST00000531405 A0A087WTM6 91 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 E5RGE8 158 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 IL15RAQ13261 267 aa12.51□□□□□ -0.41
SSSCA1-206ENST00000531405 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms