RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ETDBQ3ZM63 59 aa12.37□□□□□ -0.43
PCDHA4-203ENST00000530339 TRBV20-1A0A075B6N2 111 aa12.37□□□□□ -0.43
PCDHA4-203ENST00000530339 CHCHD5Q9BSY4 110 aa12.37□□□□□ -0.43
PCDHA4-203ENST00000530339 ZNF503-AS2A6NEH8 195 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 NPC2P61916 151 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 C8orf49Q96NF6 230 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 RHODO00212 210 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 WT1-ASQ06250 92 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 PSCAO43653 123 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 SAA4P35542 130 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 WIPF2Q8TF74 440 aaPredicted RBP12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 SIGLEC8Q9NYZ4 499 aa12.36□□□□□ -0.43
PCDHA4-203ENST00000530339 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 A0A1W2PPM0 123 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 C2orf66Q6UXQ4 117 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 FXYD5Q96DB9 178 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 KAAG1Q9UBP8 84 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 MYMXA0A1B0GTQ4 84 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 LINC00158P58513 81 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 TIMM21Q9BVV7 248 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 KLHL30-AS1Q8NEE0 82 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 RNF138Q8WVD3 245 aa12.35□□□□□ -0.43
PCDHA4-203ENST00000530339 MSMBP08118 114 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 Q6ZSR3 168 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 FCN3O75636 299 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 NBL1P41271 181 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 ZNF134P52741 427 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 PLA2G2CQ5R387 149 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 LCNL1Q6ZST4 164 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 PRR25Q96S07 402 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 SIVA1O15304 175 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 KLF5Q13887 457 aaPredicted RBP12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 TICRRQ7Z2Z1 1910 aa12.34□□□□□ -0.43
PCDHA4-203ENST00000530339 YLPM1P49750 1951 aaKnown RBP12.33□□□□□ -0.43
PCDHA4-203ENST00000530339 NBASA2RRP1 2371 aa12.33□□□□□ -0.43
PCDHA4-203ENST00000530339 H3BRN7 92 aa12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 J3QLI3 93 aa12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 LOXP28300 417 aaPredicted RBP12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
PCDHA4-203ENST00000530339 S100A7L2Q5SY68 101 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 BPESC1Q9GZL8 116 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 A0A087WWL8 130 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 TAL2Q16559 108 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
PCDHA4-203ENST00000530339 IGHV2-70DA0A0C4DH43 119 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 K7EM74 188 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 SPXQ9BT56 116 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 ANAPC1Q9H1A4 1944 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 NDUFA4O00483 81 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 BRD3OSQ6XYD6 125 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 IL17RELQ6ZVW7 336 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 ZC2HC1AQ96GY0 325 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 NPYP01303 97 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 C1orf122Q6ZSJ8 110 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 IGHV1-69DA0A0B4J2H0 117 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 IGHV1-69P01742 117 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 CDKN1BP46527 198 aa12.31□□□□□ -0.44
PCDHA4-203ENST00000530339 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 DEFB125Q8N687 156 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 GATD1Q8NB37 220 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 ZNF747Q9BV97 191 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 MRPL35Q9NZE8 188 aaKnown RBP12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 H3BUA1 57 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 LTAP01374 205 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 PAX4O43316 350 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 PMVKQ15126 192 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 DUX4L9Q6RFH8 374 aaPredicted RBP12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
PCDHA4-203ENST00000530339 ATP6V0E1O15342 81 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 CEND1Q8N111 149 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 PHLDA1Q8WV24 401 aaPredicted RBP12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 NUPR1O60356 82 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 OR11H6Q8NGC7 330 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
PCDHA4-203ENST00000530339 F8VRH5 84 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms