RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SCGB1C2P0DMR2 95 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 C7orf71A4D174 169 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 LINC00614P0C842 121 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
USP47-207ENST00000527733 PRR25Q96S07 402 aa11.8□□□□□ -0.52
USP47-207ENST00000527733 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
USP47-207ENST00000527733 AMBPP02760 352 aa11.8□□□□□ -0.52
USP47-207ENST00000527733 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
USP47-207ENST00000527733 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 FASNP49327 2511 aaKnown RBP11.79□□□□□ -0.52
USP47-207ENST00000527733 A6NDX4 124 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.79□□□□□ -0.52
USP47-207ENST00000527733 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP47-207ENST00000527733 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 SPINK13Q1W4C9 94 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 WFDC11Q8NEX6 87 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
USP47-207ENST00000527733 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 ARMS2P0C7Q2 107 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 EVI2AP22794 236 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 CT83Q5H943 113 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 CCL24O00175 119 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 ORMDL2Q53FV1 153 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 TMEM160Q9NX00 188 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 PLP1P60201 277 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 A0A1B0GUS0 222 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 HBDP02042 147 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
USP47-207ENST00000527733 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 DEFB136Q30KP8 78 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 C1orf229Q6ZS94 237 aaPredicted RBP11.77□□□□□ -0.52
USP47-207ENST00000527733 C8orf49Q96NF6 230 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 MIEN1Q9BRT3 115 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.52
USP47-207ENST00000527733 XCL2Q9UBD3 114 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 UQCR10Q9UDW1 63 aa11.77□□□□□ -0.52
USP47-207ENST00000527733 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
USP47-207ENST00000527733 D6R8Y8 96 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 ATP6V0BQ99437 205 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 FOXC2Q99958 501 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 EXPH5Q8NEV8 1989 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 NCR2O95944 276 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 FAM231DQ6ZW35 169 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 NIT1Q86X76 327 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 DYNAPQ8N1N2 210 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.53
USP47-207ENST00000527733 EIF4EBP1Q13541 118 aaPredicted RBP11.76□□□□□ -0.53
USP47-207ENST00000527733 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 CFHR4Q92496 578 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 A6NDN8 102 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
USP47-207ENST00000527733 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
USP47-207ENST00000527733 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
USP47-207ENST00000527733 CHCHD1Q96BP2 118 aaKnown RBP11.76□□□□□ -0.53
USP47-207ENST00000527733 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 IGKV1OR2-108A0A075B7D4 117 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 CDKN1BP46527 198 aa11.76□□□□□ -0.53
USP47-207ENST00000527733 COTL1Q14019 142 aa11.75□□□□□ -0.53
USP47-207ENST00000527733 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
USP47-207ENST00000527733 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
USP47-207ENST00000527733 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
USP47-207ENST00000527733 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
USP47-207ENST00000527733 DEFB121Q5J5C9 76 aa11.75□□□□□ -0.53
USP47-207ENST00000527733 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
USP47-207ENST00000527733 MRPL36Q9P0J6 103 aaKnown RBP11.75□□□□□ -0.53
USP47-207ENST00000527733 PRRC2CQ9Y520 2896 aaKnown RBP11.74□□□□□ -0.53
USP47-207ENST00000527733 VGLL1Q99990 258 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 LINC00518Q8N0U6 118 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 BUB3O43684 328 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 GP9P14770 177 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
USP47-207ENST00000527733 LINC01549A6NIU2 74 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 LY6LH3BQJ8 138 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 MRPL53Q96EL3 112 aaKnown RBP11.73□□□□□ -0.53
USP47-207ENST00000527733 VCX2Q9H322 139 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 PRADC1Q9BSG0 188 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 ABCA12Q86UK0 2595 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 SLURP1P55000 103 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 RPL36AP83881 106 aaKnown RBP11.73□□□□□ -0.53
USP47-207ENST00000527733 EBI3Q14213 229 aa11.73□□□□□ -0.53
USP47-207ENST00000527733 RPL36ALQ969Q0 106 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms