RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MKXQ8IYA7 352 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SAXO1Q8IYX7 474 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF664Q8N3J9 261 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 C11orf42Q8N5U0 333 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 ZIC4Q8N9L1 334 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 ZNRF1Q8ND25 227 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 OR5A2Q8NGI9 324 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 HIST1H2BAQ96A08 127 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 NABP1Q96AH0 204 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SLC35E1Q96K37 410 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 GPR82Q96P67 336 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SPACA5Q96QH8 159 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SPIN2AQ99865 258 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SPIN2BQ9BPZ2 258 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 NRIP2Q9BQI9 281 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SEC11CQ9BY50 192 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 GNB1LQ9BYB4 327 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 LINC00470Q9BZP3 86 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SMDT1Q9H4I9 107 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF286AQ9HBT8 521 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 PARP11Q9NR21 331 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 RFNGQ9Y644 331 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
PABPC1-223ENST00000523636 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 A0A1B0GX51 115 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 CRYM-AS1A6NIL9 109 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 J3KT08 172 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 SDCBPO00560 298 aaPredicted RBP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 RBFOX2O43251 390 aaKnown RBP eCLIP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 TNFSF12O43508 249 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 OR7C2O60412 319 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 KBTBD11O94819 623 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 AMBPP02760 352 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 FCGR3AP08637 254 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 SEC11BP0C7V7 166 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 INAFM2P0DMQ5 153 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 ORM2P19652 201 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 MFAP2P55001 183 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 NANOS2P60321 138 aaKnown RBP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 S100A10P60903 97 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 CACNG7P62955 275 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 IL15RAQ13261 267 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 ECSCRQ19T08 205 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 RSPO1Q2MKA7 263 aaPredicted RBP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 LINC00242Q5T6M2 205 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 TSPO2Q5TGU0 170 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 AADACL3Q5VUY0 350 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 Q6ZS49 121 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 LINC00596Q86U02 117 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 SLC35G3Q8N808 338 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 RTN4IP1Q8WWV3 396 aaPredicted RBP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 MBD3L1Q8WWY6 194 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 GALNT14Q96FL9 552 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 ABHD14BQ96IU4 210 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 PSMG3Q9BT73 122 aaPredicted RBP3.82□□□□□ -1.8
PABPC1-223ENST00000523636 OR2H1Q9GZK4 316 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 SLC25A31Q9H0C2 315 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 TMEM222Q9H0R3 208 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 NAA60Q9H7X0 242 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 TAF9BQ9HBM6 251 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 CYTL1Q9NRR1 136 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 NAT8Q9UHE5 227 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 ERG28Q9UKR5 140 aa3.82□□□□□ -1.8
PABPC1-223ENST00000523636 IGKV1D-13A0A0B4J2D9 117 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 DUXBA0A1W2PPF3 345 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 C8orf87E5RJ46 101 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 RTL8CO15255 209 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 PDCD6O75340 191 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 HBZP02008 142 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 ATP5G1P05496 136 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 SNRPCP09234 159 aaKnown RBP3.81□□□□□ -1.8
PABPC1-223ENST00000523636 IGKV1-13P0DP09 117 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 FGF6P10767 208 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF32P17041 273 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 NPY1RP25929 384 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 FCGR2CP31995 323 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 TAS2R30P59541 319 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 SUPT4H1P63272 117 aaKnown RBP3.81□□□□□ -1.8
PABPC1-223ENST00000523636 HIST1H1AQ02539 215 aaPredicted RBP3.81□□□□□ -1.8
PABPC1-223ENST00000523636 IQCJQ1A5X6 159 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 MPV17LQ2QL34 196 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 KRTAP27-1Q3LI81 207 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF718Q3SXZ3 478 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 TTC32Q5I0X7 151 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 C6orf201Q7Z4U5 140 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 ZNF491Q8N8L2 437 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 NDFIP1Q9BT67 221 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 OR51I2Q9H344 312 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 CALYQ9NYX4 217 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 AK3Q9UIJ7 227 aa3.81□□□□□ -1.8
PABPC1-223ENST00000523636 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 TRAV38-1A0A0B4J264 116 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 C3orf85A0A1B0GTC6 90 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 UMAD1C9J7I0 102 aa3.8□□□□□ -1.8
PABPC1-223ENST00000523636 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
PABPC1-223ENST00000523636 IGHV1-69P01742 117 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms