RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 CAMLGP49069 296 aa10.23□□□□□ -0.77
PRKDC-204ENST00000521331 OR1L4Q8NGR5 311 aa10.23□□□□□ -0.77
PRKDC-204ENST00000521331 C7orf66A4D0T2 115 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 Q5BKY6 102 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 TRIQKQ629K1 86 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-204ENST00000521331 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
PRKDC-204ENST00000521331 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
PRKDC-204ENST00000521331 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
PRKDC-204ENST00000521331 TRGV1A0A0A0MS02 117 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 C7orf71A4D174 169 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 L7N2F9 121 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 MBPP02686 304 aaPredicted RBP10.21□□□□□ -0.77
PRKDC-204ENST00000521331 ERVFC1-1P60608 527 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 VAMP2P63027 116 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 ENKURQ8TC29 256 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 PFDN5Q99471 154 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 FUT9Q9Y231 359 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.77
PRKDC-204ENST00000521331 LYRM1O43325 122 aa10.2□□□□□ -0.78
PRKDC-204ENST00000521331 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
PRKDC-204ENST00000521331 EIF4E3Q8N5X7 224 aaKnown RBP10.2□□□□□ -0.78
PRKDC-204ENST00000521331 ALG5Q9Y673 324 aa10.2□□□□□ -0.78
PRKDC-204ENST00000521331 TRBV19A0A075B6N1 114 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 KLLNB2CW77 178 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 PAX4O43316 350 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 SPINK4O60575 86 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
PRKDC-204ENST00000521331 NXPH4O95158 308 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 MIC13Q5XKP0 118 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 LINC00477Q96M19 166 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 UQCC1Q9NVA1 299 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 PRELID1Q9Y255 219 aa10.19□□□□□ -0.78
PRKDC-204ENST00000521331 RPL29P47914 159 aaKnown RBP10.18□□□□□ -0.78
PRKDC-204ENST00000521331 CAV2P51636 162 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 TCL1AP56279 114 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 ERCC8Q13216 396 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 SLAQ13239 276 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 PDE6HQ13956 83 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
PRKDC-204ENST00000521331 LYPD1Q8N2G4 141 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 FAM19A4Q96LR4 140 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 C20orf85Q9H1P6 137 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 WDR83OSQ9Y284 106 aa10.18□□□□□ -0.78
PRKDC-204ENST00000521331 FAM240BA0A1B0GVZ2 78 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 M0R3E3 92 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 MPDU1O75352 247 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 NMBP08949 121 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
PRKDC-204ENST00000521331 BTCP35070 178 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 BTN1A1Q13410 526 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 SLC39A9Q9NUM3 307 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 LSM5Q9Y4Y9 91 aaKnown RBP10.17□□□□□ -0.78
PRKDC-204ENST00000521331 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
PRKDC-204ENST00000521331 HERC1Q15751 4861 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 TRAV9-2A0A087WT02 112 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 LINC00862A6NCI5 91 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 INMT-MINDY4F8WBC2 141 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 CST7O76096 145 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 GPX1P07203 203 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
PRKDC-204ENST00000521331 CRISP2P16562 243 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 VWC2Q2TAL6 325 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 AGPAT4-IT1Q9H0P7 198 aa10.16□□□□□ -0.78
PRKDC-204ENST00000521331 CCSO14618 274 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 NDUFB4O95168 129 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 IFNA5P01569 189 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 PVALBP20472 110 aaPredicted RBP10.15□□□□□ -0.78
PRKDC-204ENST00000521331 S100A11P31949 105 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 XGP55808 180 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 BAXQ07812 192 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 MRPL23Q16540 153 aaKnown RBP10.15□□□□□ -0.78
PRKDC-204ENST00000521331 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 C9orf62Q8N4C0 152 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 VGLL1Q99990 258 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 HHLA3Q9XRX5 114 aa10.15□□□□□ -0.78
PRKDC-204ENST00000521331 UBE2L5PA0A1B0GUS4 154 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 FAM24AA6NFZ4 105 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 FAM25EA8MYX2 175 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 K7EP13 123 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 IGHV3-53P01767 116 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 CRYBA4P53673 196 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 HBG1P69891 147 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 HBG2P69892 147 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 TMEM78Q5T7P6 136 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 LYPD5Q6UWN5 251 aa10.14□□□□□ -0.79
PRKDC-204ENST00000521331 FRZBQ92765 325 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms