RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 AGPAT4-IT1Q9H0P7 198 aa13.69□□□□□ -0.22
HDAC2-207ENST00000520170 WDR83OSQ9Y284 106 aa13.69□□□□□ -0.22
HDAC2-207ENST00000520170 FAM24AA6NFZ4 105 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 SPINK4O60575 86 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 GPX1P07203 203 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 TCL1AP56279 114 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 C12orf45Q8N5I9 185 aaPredicted RBP13.68□□□□□ -0.22
HDAC2-207ENST00000520170 LINC00477Q96M19 166 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 SLC39A9Q9NUM3 307 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 TIMM9Q9Y5J7 89 aa13.68□□□□□ -0.22
HDAC2-207ENST00000520170 UBE2L5PA0A1B0GUS4 154 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 MPDU1O75352 247 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 NDUFB4O95168 129 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 BAXQ07812 192 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 BLNKQ8WV28 456 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 ST6GAL2Q96JF0 529 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 FAM19A4Q96LR4 140 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 SDHCQ99643 169 aaPredicted RBP13.67□□□□□ -0.22
HDAC2-207ENST00000520170 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
HDAC2-207ENST00000520170 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 PRELID1Q9Y255 219 aa13.67□□□□□ -0.22
HDAC2-207ENST00000520170 INAFM2P0DMQ5 153 aa13.66□□□□□ -0.22
HDAC2-207ENST00000520170 HIST1H1EP10412 219 aaKnown RBP13.66□□□□□ -0.22
HDAC2-207ENST00000520170 RPL29P47914 159 aaKnown RBP13.66□□□□□ -0.22
HDAC2-207ENST00000520170 XGP55808 180 aa13.66□□□□□ -0.22
HDAC2-207ENST00000520170 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
HDAC2-207ENST00000520170 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
HDAC2-207ENST00000520170 C5orf51A6NDU8 294 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 RGS13O14921 159 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 PYYP10082 97 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 CDPF1Q6NVV7 123 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 LYPD5Q6UWN5 251 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 C8orf49Q96NF6 230 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 TMEM14CQ9P0S9 112 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 PRO0255Q9UI72 69 aa13.65□□□□□ -0.22
HDAC2-207ENST00000520170 DMBT1Q9UGM3 2413 aaPredicted RBP13.64□□□□□ -0.23
HDAC2-207ENST00000520170 IGKV2-40A0A087WW87 121 aaPredicted RBP13.64□□□□□ -0.23
HDAC2-207ENST00000520170 PRAF2O60831 178 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 IGKV2D-40P01614 121 aaPredicted RBP13.64□□□□□ -0.23
HDAC2-207ENST00000520170 DNAH10OSP0CZ25 163 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 CRISP2P16562 243 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 CRYBA4P53673 196 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 VWC2Q2TAL6 325 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 CNPY1Q3B7I2 92 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 IBA57Q5T440 356 aaKnown RBP13.64□□□□□ -0.23
HDAC2-207ENST00000520170 Q6ZQT7 251 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 C11orf1Q9H5F2 150 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 AAMDCQ9H7C9 122 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 HHLA3Q9XRX5 114 aa13.64□□□□□ -0.23
HDAC2-207ENST00000520170 FAT1Q14517 4588 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 PVALBP20472 110 aaPredicted RBP13.63□□□□□ -0.23
HDAC2-207ENST00000520170 FGF7P21781 194 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 S100A11P31949 105 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 PDE6HQ13956 83 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 ICAM4Q14773 271 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 MRPL23Q16540 153 aaKnown RBP13.63□□□□□ -0.23
HDAC2-207ENST00000520170 TMEM78Q5T7P6 136 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 PRR9Q5T870 116 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 NFE4Q86UQ8 179 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 VGLL1Q99990 258 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 ARPC5LQ9BPX5 153 aa13.63□□□□□ -0.23
HDAC2-207ENST00000520170 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 IGSF23A1L1A6 192 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 IFNA5P01569 189 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 IL7P13232 177 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 SULT1A1P50225 295 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 S100A10P60903 97 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 SLAQ13239 276 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 FHL2Q14192 279 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 FAM122CQ6P4D5 195 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 C2orf50Q96LR7 162 aa13.62□□□□□ -0.23
HDAC2-207ENST00000520170 RBM38Q9H0Z9 239 aaKnown RBP13.62□□□□□ -0.23
HDAC2-207ENST00000520170 TRAV6A0A075B6T7 132 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 TRAV9-2A0A087WT02 112 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 A0A087WTM6 91 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 NMBP08949 121 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 KRTAP10-1P60331 282 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 Q5VSD8 79 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 NEGR1Q7Z3B1 354 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 FRZBQ92765 325 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 SEC22CQ9BRL7 303 aa13.61□□□□□ -0.23
HDAC2-207ENST00000520170 E5RGE8 158 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 HBG1P69891 147 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 HBG2P69892 147 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 STX12Q86Y82 276 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 GPN1Q9HCN4 374 aaPredicted RBP13.6□□□□□ -0.23
HDAC2-207ENST00000520170 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
HDAC2-207ENST00000520170 ZNF492Q9P255 531 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 LY96Q9Y6Y9 160 aa13.6□□□□□ -0.23
HDAC2-207ENST00000520170 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
HDAC2-207ENST00000520170 PLA2G10O15496 165 aa13.59□□□□□ -0.23
HDAC2-207ENST00000520170 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
HDAC2-207ENST00000520170 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms