RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MRPS14O60783 128 aaKnown RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 REG1AP05451 166 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 CGB3P0DN86 165 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 PSMB3P49720 205 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FLI1Q01543 452 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FADDQ13158 208 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 SNCBQ16143 134 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACOT6Q3I5F7 207 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 LAIR2Q6ISS4 152 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM19A3Q7Z5A8 133 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 GRPEL2Q8TAA5 225 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 RASSF5Q8WWW0 418 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR5P3Q8WZ94 311 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 AQP3Q92482 292 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TMEM14BQ9NUH8 114 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TAS2R1Q9NYW7 299 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 MPC1Q9Y5U8 109 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 LHFPL6Q9Y693 200 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PPP5D1E7EU14 171 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF737O75373 536 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PFN1P07737 140 aaKnown RBP2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 LINC00032P0C843 101 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 GNG3P63215 75 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 AKIRIN2Q53H80 203 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 CLVS2Q5SYC1 327 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 Q6ZSA8 131 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF709Q8N972 641 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF680Q8NEM1 530 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 SLC35B4Q969S0 331 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 MAGOHBQ96A72 148 aaKnown RBP2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 PBOV1Q9GZY1 135 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 KCNIP2Q9NS61 270 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 COA4Q9NYJ1 87 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 NUBP2Q9Y5Y2 271 aa2.69□□□□□ -1.98
HMGB1P23-201ENST00000518743 FUOMA2VDF0 154 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CPSF4LA6NMK7 179 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 A8MUU9 505 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 C5orf58C9J3I9 102 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 H3BUA1 57 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CHP2O43745 196 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IL6P05231 212 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ATP6V0CP27449 155 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 S100A2P29034 98 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 RPL12P30050 165 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CDKN2CP42773 168 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 CXCR4P61073 352 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPIN3Q5JUX0 258 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 TCF24Q7RTU0 167 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 RNF182Q8N6D2 247 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACY3Q96HD9 319 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ABHD14BQ96IU4 210 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 MRPL57Q9BQC6 102 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR51I2Q9H344 312 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 LSM5Q9Y4Y9 91 aaKnown RBP2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 ICOSQ9Y6W8 199 aa2.68□□□□□ -1.98
HMGB1P23-201ENST00000518743 IGKV3-7A0A075B6H7 116 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF729A6NN14 1252 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 NOS1APO75052 506 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 RPP14O95059 124 aaKnown RBP2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HAAOP46952 286 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST1H3AP68431 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 FABP5Q01469 135 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST2H3PS2Q5TEC6 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPATA31B1PQ5VZV4 182 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 EBLN2Q6P2I7 272 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 RASSF6Q6ZTQ3 369 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST2H3AQ71DI3 136 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 PFN4Q8NHR9 129 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 USMG5Q96IX5 58 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 LINC01600Q96MT4 127 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 MED28Q9H204 178 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR2D2Q9H210 308 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 FKBP14Q9NWM8 211 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF492Q9P255 531 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 ALG5Q9Y673 324 aa2.67□□□□□ -1.98
HMGB1P23-201ENST00000518743 TMEM189A5PLL7 270 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM159BA6NKW6 160 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 H3BQ85 93 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 GGCTO75223 188 aaKnown RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ATP5G1P05496 136 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 TGFBR1P36897 503 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 OMPP47874 163 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 PPP1R1AQ13522 171 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 SPCS2Q15005 226 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 LGALSLQ3ZCW2 172 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ACSM3Q53FZ2 586 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 SAPCD1Q5SSQ6 148 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM78BQ5VT40 261 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 Q8N814 137 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 HIST1H2BAQ96A08 127 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF2Q9BSG1 426 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 IL20Q9NYY1 176 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 IDI2-AS1Q9NZ38 188 aa2.66□□□□□ -1.98
HMGB1P23-201ENST00000518743 TRAV27A0A087WT01 109 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A1B0GV50 99 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 ODAMA1E959 279 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms