RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TCEAL2Q9H3H9 227 aaPredicted RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 PEAK1Q9H792 1746 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 SPANXA1Q9NS26 97 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 HSPB8Q9UJY1 196 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 MCM3APO60318 1980 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 FBN2P35556 2912 aa0.85□□□□□ -2.27
SQLE-202ENST00000518604 VIRMAQ69YN4 1812 aaKnown RBP0.85□□□□□ -2.27
SQLE-202ENST00000518604 FANCMQ8IYD8 2048 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 SCN3AQ9NY46 2000 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 NCOA6Q14686 2063 aaPredicted RBP0.84□□□□□ -2.27
SQLE-202ENST00000518604 ARHGAP31Q2M1Z3 1444 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 PRG4Q92954 1404 aaPredicted RBP0.84□□□□□ -2.27
SQLE-202ENST00000518604 hDV103S1A0JD37 113 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 ZNF727A8MUV8 499 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 H3BMG7 143 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 CCL25O15444 150 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 OR2H2O95918 312 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 IFNA4P05014 189 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 SLC25A5P05141 298 aaKnown RBP0.84□□□□□ -2.27
SQLE-202ENST00000518604 FREM3P0C091 2139 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 MPC1LP0DKB6 136 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 CCL4P13236 92 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 HIST1H1AQ02539 215 aaPredicted RBP0.84□□□□□ -2.27
SQLE-202ENST00000518604 GLYATL3Q5SZD4 288 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 C4orf22Q6V702 233 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 LINC00322Q6ZN03 302 aaPredicted RBP0.84□□□□□ -2.27
SQLE-202ENST00000518604 IFT20Q8IY31 132 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 OR5A2Q8NGI9 324 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 OR51A4Q8NGJ6 313 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 OR5D14Q8NGL3 314 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 OR5H6Q8NGV6 325 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 RAB37Q96AX2 223 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 TP53RKQ96S44 253 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 LXNQ9BS40 222 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 TMEM138Q9NPI0 162 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 LY96Q9Y6Y9 160 aa0.84□□□□□ -2.27
SQLE-202ENST00000518604 TANC2Q9HCD6 1990 aa0.84□□□□□ -2.28
SQLE-202ENST00000518604 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
SQLE-202ENST00000518604 HEATR1Q9H583 2144 aaKnown RBP0.83□□□□□ -2.28
SQLE-202ENST00000518604 PEG3Q9GZU2 1588 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 NCOA3Q9Y6Q9 1424 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 TRAV10A0A0B4J240 114 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 C9orf170A2RU37 121 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 C17orf112F2Z3M2 114 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 M0R233 179 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 DPM2O94777 84 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 MT-ND6P03923 174 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 TCRAP04437 139 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 FABP4P15090 132 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 KDELR1P24390 212 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 MAXP61244 160 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 QRFPP83859 136 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 TMEM244Q5VVB8 128 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 ZCCHC23Q6ZST2 131 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 ARPINQ7Z6K5 226 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 CROCCP2Q86T23 111 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 TCTE3Q8IZS6 198 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 MCEEQ96PE7 176 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 NABP2Q9BQ15 211 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 FAM107BQ9H098 131 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 FKBP11Q9NYL4 201 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 ORMDL1Q9P0S3 153 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 TMEM14CQ9P0S9 112 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 ALPK3Q96L96 1907 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
SQLE-202ENST00000518604 PHLPP1O60346 1717 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 TRAV27A0A087WT01 109 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 A0A096LPI6 279 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 A6NN06 94 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 NCR3O14931 201 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 NUPR1O60356 82 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 DBIP07108 87 aaKnown RBP0.82□□□□□ -2.28
SQLE-202ENST00000518604 TSPAN19P0C672 248 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 PRB4P10163 310 aaPredicted RBP0.82□□□□□ -2.28
SQLE-202ENST00000518604 CMPK1P30085 196 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 CDK6Q00534 326 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 MUCL1Q96DR8 90 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 OR4C12Q96R67 309 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 TPT1P8Q9HAU6 139 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 SPANXCQ9NY87 97 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 CDK5RAP2Q96SN8 1893 aa0.82□□□□□ -2.28
SQLE-202ENST00000518604 MYH1P12882 1939 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 OVOS2A0A0J9YW53 1432 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 OVOS2Q6IE36 1432 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 ERBINQ96RT1 1412 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.81□□□□□ -2.28
SQLE-202ENST00000518604 CECR2Q9BXF3 1484 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 KIAA1549LQ6ZVL6 1849 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 OR2T8A6NH00 312 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 UQCRQO14949 82 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 DNAL4O96015 105 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 HBDP02042 147 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 CD2P06729 351 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 CD14P08571 375 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 PAEPP09466 180 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 LINC00694P0DN24 101 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 SLC25A4P12235 298 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms