RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 Q56UQ5 140 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPANXN5Q5MJ07 72 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 C1orf134Q5TEV5 83 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q8N2B8 174 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 TRPM7Q96QT4 1865 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 MYO16Q9Y6X6 1858 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 R4GN34 69 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPHKAPQ2M3C7 1700 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ABCA3Q99758 1704 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 GLI3P10071 1580 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ARHGAP32A7KAX9 2087 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 C3orf85A0A1B0GTC6 90 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 A6NN06 94 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF705FA8MVS1 300 aaPredicted RBP2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 C5orf67F2Z3F1 127 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 PROSCO94903 275 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF345Q14585 488 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF846Q147U1 533 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF826PQ6ZT77 177 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 C4orf33Q8N1A6 199 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 C9orf62Q8N4C0 152 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 TTC9CQ8N5M4 171 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 PSMF1Q92530 271 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 MUCL1Q96DR8 90 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 SLC50A1Q9BRV3 221 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 CXCL16Q9H2A7 254 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 NOP16Q9Y3C1 178 aaKnown RBP2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 ROBO1Q9Y6N7 1651 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 COL24A1Q17RW2 1714 aa2.37□□□□□ -2.03
RNU4-60P-201ENST00000517239 COLCA2A8K830 154 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 J3QLW9 94 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 EDF1O60869 148 aaKnown RBP2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 BRS3P32247 399 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 ERHP84090 104 aaKnown RBP2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 PYDC2Q56P42 97 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q6AWC8 147 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q8N9L7 120 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 ATP6V0E2Q8NHE4 81 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 KLK12Q9UKR0 248 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 CCDC18Q5T9S5 1454 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 PRR14LQ5THK1 2151 aa2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 ARID1BQ8NFD5 2236 aaPredicted RBP2.36□□□□□ -2.03
RNU4-60P-201ENST00000517239 NACAE9PAV3 2078 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 TROQ12816 1431 aaPredicted RBP2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 KDM5AP29375 1690 aaKnown RBP2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 ADGRL1O94910 1474 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 ADGRL2O95490 1459 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 A0A1W2PRS3 328 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 CGAP01215 116 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 IL5P05113 134 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 SSR2P43308 183 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPINK14Q6IE38 97 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 OR2T2Q6IF00 324 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 FAM19A2Q8N3H0 131 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 PLPP5Q8NEB5 264 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 OR4X2Q8NGF9 303 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 LINC00526Q96FQ7 95 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 V9GYS6 101 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 ARHGAP5Q13017 1502 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 CROCCQ5TZA2 2017 aa2.35□□□□□ -2.03
RNU4-60P-201ENST00000517239 KIAA1549LQ6ZVL6 1849 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 IGKV2D-24A0A075B6R9 120 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 OOSP1A8MZH6 123 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 G3V3Q6 166 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 ASAH2BP0C7U1 165 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 BAALC-AS2P0C853 105 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF791Q3KP31 576 aaPredicted RBP2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 CASC2Q6XLA1 102 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q6ZS92 163 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 ARPINQ7Z6K5 226 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 TMEM254Q8TBM7 123 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPTSSAQ969W0 71 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q96M85 177 aa2.34□□□□□ -2.03
RNU4-60P-201ENST00000517239 MCM3APO60318 1980 aa2.34□□□□□ -2.04
RNU4-60P-201ENST00000517239 NSD3Q9BZ95 1437 aa2.34□□□□□ -2.04
RNU4-60P-201ENST00000517239 IGLV2-18A0A075B6J9 118 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 ODF3BA8MYP8 253 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 SNCGO76070 127 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 UBL3O95164 117 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 HRES1P13985 223 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 MIFP14174 115 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 NPC2P61916 151 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 UBA52P62987 128 aaKnown RBP2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 DEFB113Q30KQ7 82 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 FOXI2Q6ZQN5 318 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 C10orf105Q8TEF2 133 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 TMEM242Q9NWH2 141 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 SCN3AQ9NY46 2000 aa2.33□□□□□ -2.04
RNU4-60P-201ENST00000517239 RBBP6Q7Z6E9 1792 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms