RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TPT1P13693 172 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 NKX2-5P52952 324 aaPredicted RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 APOC4P55056 127 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RANP62826 216 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 UBE2L3P68036 154 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KHDC3LQ587J8 217 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 GDF5OSQ5U4N7 250 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 EIF5AL1Q6IS14 154 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 LINC00322Q6ZN03 302 aaPredicted RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FOXI2Q6ZQN5 318 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 IQCF2Q8IXL9 164 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 BAP18Q8IXM2 172 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 Q8N1X5 172 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RPUSD4Q96CM3 377 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SLC50A1Q9BRV3 221 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF331Q9NQX6 463 aaPredicted RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CLEC5AQ9NY25 188 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KMT2CQ8NEZ4 4911 aaKnown RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CTXND1A0A1B0GTU2 59 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PGPA6NDG6 321 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 H3BMM0 161 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 DUSP14O95147 198 aaKnown RBP4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 STAG3L2P0CL84 134 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 STAG3L3P0CL85 134 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HLA-DRB4P13762 266 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FXYD7P58549 80 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HIST1H1AQ02539 215 aaPredicted RBP4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PDE6HQ13956 83 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MORN3Q6PF18 240 aaPredicted RBP4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SLC51BQ86UW2 128 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 EXOC3-AS1Q8N2X6 119 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OR8A1Q8NGG7 326 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TMED6Q8WW62 240 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HLA-DRB4X5D2U9 266 aa4.25□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KIR2DL5BA0A0G2JN68 375 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KIR2DL5BA0A0G2JPC4 375 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 A0A0J9YX75 114 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PRAC2D3DTV9 90 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 M0R3E3 92 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF253O75346 499 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CXorf1O96002 111 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ARL14EPLP0DKL9 152 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 GCHFRP30047 84 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CSN1S1P47710 185 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CNN1P51911 297 aaKnown RBP4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FGF8P55075 233 aaPredicted RBP4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 NUTF2P61970 127 aaKnown RBP4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 DEFB135Q30KP9 77 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FAM74A1Q5RGS3 127 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KIR2DL5AQ8N109 375 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OR10J6PQ8NGY7 276 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KIR2DL5BQ8NHK3 375 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 STOML3Q8TAV4 291 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FAM213BQ8TBF2 198 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PHYHIPLQ96FC7 376 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 Q9H3A6 140 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TMPRSS5Q9H3S3 457 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RETNQ9HD89 108 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TMEM167BQ9NRX6 74 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 XCL2Q9UBD3 114 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PRELID1Q9Y255 219 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 AGRNO00468 2067 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
SCARNA6.1-201ENST00000516989 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 A0A1B0GV50 99 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MAP1LC3B2A6NCE7 125 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 UMAD1C9J7I0 102 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FHITP49789 147 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RAB5CP51148 216 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ERCC8Q13216 396 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FHL2Q14192 279 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF726P1Q15940 193 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SSX7Q7RTT5 188 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 LYPD1Q8N2G4 141 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CMTM2Q8TAZ6 248 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RXFP4Q8TDU9 374 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 C1QTNF4Q9BXJ3 329 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 MAP1LC3BQ9GZQ8 125 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SLC35B3Q9H1N7 401 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OTORQ9NRC9 128 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RPH3ALQ9UNE2 315 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 U3KQK5 164 aa4.23□□□□□ -1.73
SCARNA6.1-201ENST00000516989 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 A4D1N5 150 aa4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 GIG44P09565 113 aaPredicted RBP4.22□□□□□ -1.73
SCARNA6.1-201ENST00000516989 UBE2G2P60604 165 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms