RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 MCRIP2Q9BUT9 160 aaKnown RBP13.51□□□□□ -0.25
SNX2-213ENST00000514949 U3KQE9 123 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 MED13LQ71F56 2210 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 NCR2O95944 276 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 CKS2P33552 79 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 BVES-AS1Q5T3Y7 98 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 EEF1AKMT3Q96AZ1 226 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 PPP1R14DQ9NXH3 145 aa13.51□□□□□ -0.25
SNX2-213ENST00000514949 PRAC2D3DTV9 90 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 NPFFO15130 113 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 HBDP02042 147 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 RNF185Q96GF1 192 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 TP73-AS1Q9UF72 201 aa13.5□□□□□ -0.25
SNX2-213ENST00000514949 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 LOC389332A0A1B0GUA5 103 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 HIST1H1AQ02539 215 aaPredicted RBP13.49□□□□□ -0.25
SNX2-213ENST00000514949 UBE2V1Q13404 147 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 C5orf56Q8N8D9 126 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 BPESC1Q9GZL8 116 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 HIF1ANQ9NWT6 349 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 NUDT3O95989 172 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 NPYP01303 97 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 ORM1P02763 201 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
SNX2-213ENST00000514949 OR1N2Q8NGR9 330 aa13.49□□□□□ -0.25
SNX2-213ENST00000514949 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
SNX2-213ENST00000514949 G3V318 75 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 H0Y8G0 127 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 CCL25O15444 150 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 TCF21O43680 179 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 C19orf54Q5BKX5 351 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 LINC01548A6NM66 108 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 ERCC8Q13216 396 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 METTL26Q96S19 204 aa13.48□□□□□ -0.25
SNX2-213ENST00000514949 TRAV8-2A0A0B4J237 113 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 SFTPCP11686 197 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 NHLH1Q02575 133 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 MUC21Q5SSG8 566 aa13.47□□□□□ -0.25
SNX2-213ENST00000514949 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
SNX2-213ENST00000514949 PTTG1IPP53801 180 aa13.46□□□□□ -0.25
SNX2-213ENST00000514949 Q6ZVH6 145 aa13.46□□□□□ -0.25
SNX2-213ENST00000514949 ITLN2Q8WWU7 325 aaPredicted RBP13.46□□□□□ -0.25
SNX2-213ENST00000514949 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
SNX2-213ENST00000514949 C9orf47Q6ZRZ4 202 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 C2orf91Q6ZV80 131 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 IL17RELQ6ZVW7 336 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 RNF182Q8N6D2 247 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 OR8A1Q8NGG7 326 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 MSRB1Q9NZV6 116 aa13.46□□□□□ -0.26
SNX2-213ENST00000514949 FGF6P10767 208 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 IGKV3D-20A0A0C4DH25 116 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 SMKR1H3BMG3 65 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 TAX1BP3O14907 124 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 ATP5G2Q06055 141 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 PRSS57Q6UWY2 283 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 MAP1LC3AQ9H492 121 aa13.45□□□□□ -0.26
SNX2-213ENST00000514949 C8orf86Q6ZUL3 223 aa13.44□□□□□ -0.26
SNX2-213ENST00000514949 MOB4Q9Y3A3 225 aa13.44□□□□□ -0.26
SNX2-213ENST00000514949 CACNA1BQ00975 2339 aa13.43□□□□□ -0.26
SNX2-213ENST00000514949 CD5LO43866 347 aa13.43□□□□□ -0.26
SNX2-213ENST00000514949 BRI3O95415 125 aa13.43□□□□□ -0.26
SNX2-213ENST00000514949 NXT2Q9NPJ8 142 aaKnown RBP13.43□□□□□ -0.26
SNX2-213ENST00000514949 TMEM78Q5T7P6 136 aa13.43□□□□□ -0.26
SNX2-213ENST00000514949 PIFOQ8TCI5 191 aa13.43□□□□□ -0.26
SNX2-213ENST00000514949 IGHV4-4A0A075B6R2 117 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 PSMG4Q5JS54 123 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 C11orf21Q9P2W6 132 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 IGHV3-66A0A0C4DH42 116 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 PRSS47A8MTI9 375 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 TNFRSF6BO95407 300 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 CACNG7P62955 275 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 LENEPQ9Y5L5 61 aa13.42□□□□□ -0.26
SNX2-213ENST00000514949 FCER1GP30273 86 aa13.41□□□□□ -0.26
SNX2-213ENST00000514949 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
SNX2-213ENST00000514949 MEGF9Q9H1U4 602 aa13.41□□□□□ -0.26
SNX2-213ENST00000514949 PRORYQ9H606 182 aa13.41□□□□□ -0.26
SNX2-213ENST00000514949 SIVA1O15304 175 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 LY6DQ14210 128 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 C19orf84I3L1E1 186 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 K7EP13 123 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 IGHV4-39P01824 125 aa13.4□□□□□ -0.26
SNX2-213ENST00000514949 SEC11AP67812 179 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9279.9 ms