RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZNHIT1O43257 154 aa3.97□□□□□ -1.77
PTPN13-209ENST00000511467 CRYGCP07315 174 aa3.97□□□□□ -1.77
PTPN13-209ENST00000511467 ZNF826PQ6ZT77 177 aa3.97□□□□□ -1.77
PTPN13-209ENST00000511467 NFE4Q86UQ8 179 aa3.97□□□□□ -1.77
PTPN13-209ENST00000511467 CGAP01215 116 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 HLA-DMBP28068 263 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 CLEC19AQ6UXS0 136 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 TMEM160Q9NX00 188 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 IGHV1-58A0A0C4DH39 117 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 H3BRN7 92 aa3.96□□□□□ -1.77
PTPN13-209ENST00000511467 COA6Q5JTJ3 125 aaKnown RBP3.96□□□□□ -1.77
PTPN13-209ENST00000511467 F8VRH5 84 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 MYCNOSP40205 109 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 KLF5Q13887 457 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-209ENST00000511467 RPL39P5Q59GN2 51 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 Q8N8P6 123 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 MBD6Q96DN6 1003 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 LYZL4Q96KX0 146 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 AURKAIP1Q9NWT8 199 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-209ENST00000511467 FOXF2Q12947 444 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 PYY3Q5JQD4 70 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 TMEM243Q9BU79 118 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 TRAV40A0A0B4J280 105 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 IGHV7-4-1A0A0J9YVY3 117 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 GAGE1Q13065 139 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 TMEM95Q3KNT9 176 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 C1QL2Q7Z5L3 287 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 JPT2Q9H910 190 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 LOC107984156A0A0G2JMH3 177 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 ARL17AQ8IVW1 177 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 C4orf3Q8WVX3 66 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 ITLN2Q8WWU7 325 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-209ENST00000511467 MST1P26927 711 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 BTCP35070 178 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 DEPPQ9NTK1 212 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 CRIM1Q9NZV1 1036 aa3.96□□□□□ -1.78
PTPN13-209ENST00000511467 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 CD28P10747 220 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 RNASE4P34096 147 aaKnown RBP3.95□□□□□ -1.78
PTPN13-209ENST00000511467 DEFB113Q30KQ7 82 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 IGKV1D-17A0A075B6S4 117 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 E7EQL1 145 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 WISP1O95388 367 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 CELA2AP08217 269 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 INSL4Q14641 139 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 LURAP1LQ8IV03 231 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 PRRC2CQ9Y520 2896 aaKnown RBP3.95□□□□□ -1.78
PTPN13-209ENST00000511467 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-209ENST00000511467 HIGD1BQ9P298 99 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 A0A1B0GVG6 124 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
PTPN13-209ENST00000511467 Q86TA4 180 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 C15orf65H3BRN8 121 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 C9orf47Q6ZRZ4 202 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 LYPD6Q86Y78 171 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 FAM216BQ8N7L0 139 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 KLHL30-AS1Q8NEE0 82 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 TIMM21Q9BVV7 248 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 IGHV1OR15-1A0A075B7D0 117 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 KIR2DL5BA0A0G2JN68 375 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 KIR2DL5BA0A0G2JPC4 375 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 LYRM9A8MSI8 78 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 FCN3O75636 299 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 KIR2DL5AQ8N109 375 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 GSN-AS1Q9NRJ2 163 aa3.95□□□□□ -1.78
PTPN13-209ENST00000511467 TRAV12-1A0A0B4J245 112 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 GNLYP22749 145 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 U3KQA8 63 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 SRRM4A7MD48 611 aaKnown RBP3.94□□□□□ -1.78
PTPN13-209ENST00000511467 CD5LO43866 347 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 REG4Q9BYZ8 158 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 ZNF462Q96JM2 2506 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 ATP5EP2Q5VTU8 51 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 FAM104BQ5XKR9 115 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 WFDC1Q9HC57 220 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 NDUFA3O95167 84 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 LINC01560Q8TB33 94 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 CARD19Q96LW7 228 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
PTPN13-209ENST00000511467 MST1LQ2TV78 715 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 NDUFA11Q86Y39 141 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 LAMTOR3Q9UHA4 124 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 JMJD7-PLA2G4BH0Y9G9 81 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 UBE2DNLQ8IWF7 75 aa3.94□□□□□ -1.78
PTPN13-209ENST00000511467 SCO2A0A1W2PP80 73 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 PLA2G5P39877 138 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 GAGE13Q4V321 117 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 SYS1-DBNDD2H3BUS1 97 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 IGHG2P01859 326 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 MYF5P13349 255 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 HS3ST6Q96QI5 342 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 LSM4Q9Y4Z0 139 aaKnown RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 JMJD1CQ15652 2540 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-209ENST00000511467 SPART-AS1P0CW21 52 aa3.93□□□□□ -1.78
PTPN13-209ENST00000511467 C5orf24Q7Z6I8 188 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms