RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 GLT8D1Q68CQ7 371 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 GLYATQ6IB77 296 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF880Q6PDB4 577 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 IGFL1Q6UW32 110 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 SCGB1D4Q6XE38 83 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 C1orf158Q8N1D5 194 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 LINC00311Q8N616 119 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 SLC35G3Q8N808 338 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 ZNF439Q8NDP4 499 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 OR8A1Q8NGG7 326 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 PFN4Q8NHR9 129 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 MAGOHBQ96A72 148 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 SLC25A46Q96AG3 418 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 GNPNAT1Q96EK6 184 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 CEP19Q96LK0 163 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 PPP3R2Q96LZ3 170 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 LINC00477Q96M19 166 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 C1orf50Q9BV19 199 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 OR51E2Q9H255 320 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 MS4A6AQ9H2W1 248 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 WFDC1Q9HC57 220 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 BCL2L10Q9HD36 194 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 LRRC42Q9Y546 428 aa1.91□□□□□ -2.1
TOPBP1-208ENST00000511439 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.1
TOPBP1-208ENST00000511439 C7orf66A4D0T2 115 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF705FA8MVS1 300 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 C5orf58C9J3I9 102 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF878C9JN71 531 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 H3BP45 60 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 K7EPK0 472 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 FFAR1O14842 300 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 GYG2O15488 501 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 CCNKO75909 580 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 APOC1P02654 83 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 MAS1P04201 325 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TCRBP04435 133 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ATP5G1P05496 136 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 CSN2P05814 226 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LINC00614P0C842 121 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LINC00032P0C843 101 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF705DP0CH99 300 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF705BP0CI00 300 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ATP5G3P48201 142 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 HSPA13P48723 471 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 SULT1A1P50225 295 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 SULT1A2P50226 295 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 H2BFSP57053 126 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 DEFB131AP59861 70 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 NAA20P61599 178 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 MT1HP80294 61 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 DR1Q01658 176 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 SMAGPQ0VAQ4 97 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 INSL4Q14641 139 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 CASP8Q14790 479 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TEX30Q5JUR7 227 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 CLVS2Q5SYC1 327 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 UNQ9165/PRO28630Q6UXU0 137 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF705AQ6ZN79 300 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 Q8IYB0 196 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TMEM256Q8N2U0 113 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 RNF182Q8N6D2 247 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LINC00337Q8N6G1 96 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 SLC25A29Q8N8R3 303 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 GPR32P1Q8NGA4 272 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TWIST2Q8WVJ9 160 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TAMM41Q96BW9 452 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 Q96M85 177 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 RNF5Q99942 180 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 ANAPC13Q9BS18 74 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 MROQ9BYG7 248 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 VSIRQ9H7M9 311 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LINC00574Q9H8X3 128 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 NMNAT1Q9HAN9 279 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 DAZ1Q9NQZ3 744 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 C8orf17Q9NRJ1 99 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 METTL1Q9UBP6 276 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 C14orf166Q9Y224 244 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 PRELID1Q9Y255 219 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LSM5Q9Y4Y9 91 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 LY96Q9Y6Y9 160 aa1.9□□□□□ -2.11
TOPBP1-208ENST00000511439 TRAV27A0A087WT01 109 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 MEIKINA0A087WXM9 373 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 TEX50A0A1B0GTY4 177 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 C8orf87E5RJ46 101 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 SDCBPO00560 298 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 COPEO14579 308 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 TPST1O60507 370 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 CD14P08571 375 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 CGB7P0DN87 165 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 M6PRP20645 277 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 EVI2AP22794 236 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 GADD45AP24522 165 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 DDTP30046 118 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 CXCR4P61073 352 aa1.89□□□□□ -2.11
TOPBP1-208ENST00000511439 B2MP61769 119 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms