RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF726P1Q15940 193 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 FAM120AOSQ5T036 256 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF497Q6ZNH5 498 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 C11orf53Q8IXP5 236 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 EXOC3-AS1Q8N2X6 119 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 NT5CQ8TCD5 201 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 GATAD1Q8WUU5 269 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM158Q8WZ71 300 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 C11orf52Q96A22 123 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 NABP1Q96AH0 204 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 BORCS8Q96FH0 119 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 RTL8AQ9BWD3 113 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 PILRAQ9UKJ1 303 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 EPDR1Q9UM22 224 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHD9Q3L8U1 2897 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHV1OR21-1A0A087WYE8 117 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 HMGN4O00479 90 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CDX4O14627 284 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 NPYP01303 97 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHG2P01859 326 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CTLA4P16410 223 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 MAGEA5P43359 124 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 DSCR4P56555 118 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 C1orf140Q5VVS0 124 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 DGAT2L6Q6ZPD8 337 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 GVQW1Q8N7I0 195 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CCL4L1Q8NHW4 92 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 TAF15Q92804 592 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 V9GYV3 84 aa3.55□□□□□ -1.84
HMGB3P13-201ENST00000511263 OBSL1O75147 1896 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 A0A087X002 238 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYMXA0A1B0GTQ4 84 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 C5orf63A6NC05 138 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PGPA6NDG6 321 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PGLYRP1O75594 196 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 P01737 135 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FBXW4P57775 412 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 CCL8P80075 99 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF542PQ5EBM4 170 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 LINC00643Q86TS7 51 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 DEFB119Q8N690 84 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF525Q8N782 197 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FLVCR1-AS1Q8TAF5 88 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q96M85 177 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 FOXC2Q99958 501 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRSS27Q9BQR3 290 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q9H8V8 135 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TAC3Q9UHF0 121 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 SELENOKQ9Y6D0 94 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRANK1O15050 2925 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYOFQ9NZM1 2061 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 C2orf16Q68DN1 1984 aa3.54□□□□□ -1.84
HMGB3P13-201ENST00000511263 RANBP2P49792 3224 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MED12LQ86YW9 2145 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 NUP214P35658 2090 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGHV3OR15-7A0A075B7D8 119 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRAV17A0A0B4J275 112 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 H0YGG7 62 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 H3BMM0 161 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC25A20O43772 301 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GP1BBP13224 206 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 CD59P13987 128 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 FKBP2P26885 142 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 PSMB2P49721 201 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2D3P61077 147 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2D2P62837 147 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DEFB133Q30KQ1 61 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q6ZRU5 148 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 LYZL2Q7Z4W2 148 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 RPRMLQ8N4K4 120 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 POM121L12Q8N7R1 296 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2WQ96B02 151 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MRPL53Q96EL3 112 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 ODF3Q96PU9 254 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GPX7Q96SL4 187 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 S1PR3Q99500 378 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 EMC6Q9BV81 110 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 HES7Q9BYE0 225 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 GLIPR2Q9H4G4 154 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 DYNLRB1Q9NP97 96 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 LINC00527Q9UJ94 153 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 F11RQ9Y624 299 aaKnown RBP3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 MYO16Q9Y6X6 1858 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms