RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ARMS2P0C7Q2 107 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 Q6YL49 198 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 RNF182Q8N6D2 247 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 MAPK1IP1LQ8NDC0 245 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 CTAG1AP78358 180 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF493Q6ZR52 646 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 SIGLECL1Q8N7X8 197 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 NAGKQ9UJ70 344 aa13.49□□□□□ -0.25
SFXN1-208ENST00000507823 IGHV3-49A0A0A0MS15 119 aa13.48□□□□□ -0.25
SFXN1-208ENST00000507823 SMAD7O15105 426 aaKnown RBP13.48□□□□□ -0.25
SFXN1-208ENST00000507823 SOCS3O14543 225 aa13.48□□□□□ -0.25
SFXN1-208ENST00000507823 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
SFXN1-208ENST00000507823 NPFFR1Q9GZQ6 430 aa13.48□□□□□ -0.25
SFXN1-208ENST00000507823 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
SFXN1-208ENST00000507823 CTRLP40313 264 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 POLQO75417 2590 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 ERCC8Q13216 396 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 ZNF664Q8N3J9 261 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
SFXN1-208ENST00000507823 K7EMT4 169 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 NIT1Q86X76 327 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 URB1-AS1Q96HZ7 61 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 NRN1Q9NPD7 142 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 CSMD2Q7Z408 3487 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 FABP5P3A8MUU1 101 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 AMTP48728 403 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 LINC01559Q495D7 138 aa13.46□□□□□ -0.25
SFXN1-208ENST00000507823 TSTD3H0UI37 97 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
SFXN1-208ENST00000507823 SCGB1D1O95968 90 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 ZNF138P52744 262 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 TMEM95Q3KNT9 176 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 CNFNQ9BYD5 112 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 RNF114Q9Y508 228 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 LENEPQ9Y5L5 61 aa13.45□□□□□ -0.26
SFXN1-208ENST00000507823 IGHV7-4-1A0A0J9YVY3 117 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 LYZL1Q6UWQ5 148 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 LCNL1Q6ZST4 164 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 MYOZ3Q8TDC0 251 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 BORCS7Q96B45 105 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 MAP1AP78559 2803 aaPredicted RBP13.44□□□□□ -0.26
SFXN1-208ENST00000507823 TEX43Q6ZNM6 134 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 Q8N976 141 aa13.44□□□□□ -0.26
SFXN1-208ENST00000507823 HIST1H1AQ02539 215 aaPredicted RBP13.43□□□□□ -0.26
SFXN1-208ENST00000507823 IL17RELQ6ZVW7 336 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 CHCHD1Q96BP2 118 aaKnown RBP13.43□□□□□ -0.26
SFXN1-208ENST00000507823 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 Q96MF0 132 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 C20orf173Q96LM9 149 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 DAZ1Q9NQZ3 744 aaKnown RBP13.43□□□□□ -0.26
SFXN1-208ENST00000507823 CD33P20138 364 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 PMCHP20382 165 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 TMEM78Q5T7P6 136 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
SFXN1-208ENST00000507823 RNF152Q8N8N0 203 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 SMPXQ9UHP9 88 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 U3KQK5 164 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 KIR2DL5BA0A0G2JN68 375 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 KIR2DL5BA0A0G2JPC4 375 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 KIR2DL5AQ8N109 375 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 PRO1933Q9H354 126 aa13.42□□□□□ -0.26
SFXN1-208ENST00000507823 CENPEQ02224 2701 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 HSBP1O75506 76 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 DDTP30046 118 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 TMSB15BA0A087X1C1 80 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 FOXE3Q13461 319 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 FAM19A2Q8N3H0 131 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 RHPN1-AS1Q9BWJ2 59 aa13.41□□□□□ -0.26
SFXN1-208ENST00000507823 OVOL1O14753 267 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 ELANEP08246 267 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 FAM106AQ4KMX7 169 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 PRR31Q5SQ13 230 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 Q8N2B8 174 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 ZANQ9Y493 2812 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 FAM104BQ5XKR9 115 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 LINC00477Q96M19 166 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 ABCA12Q86UK0 2595 aa13.4□□□□□ -0.26
SFXN1-208ENST00000507823 CREBBPQ92793 2442 aa13.39□□□□□ -0.27
SFXN1-208ENST00000507823 RNASEKQ6P5S7 137 aaKnown RBP13.39□□□□□ -0.27
SFXN1-208ENST00000507823 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
SFXN1-208ENST00000507823 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 TMEM213A2RRL7 107 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 ORM1P02763 201 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 C11orf21Q9P2W6 132 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 UFC1Q9Y3C8 167 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms