RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 J3KRW8 73 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 LEPP41159 167 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 EMP1P54849 157 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 RRN3P1Q2M238 152 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 LINC00477Q96M19 166 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 PLA2G2EQ9NZK7 142 aa13.07□□□□□ -0.32
PDLIM7-216ENST00000506537 PGPA6NDG6 321 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 NUPR2A6NF83 97 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 TMUB2Q71RG4 321 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 TMEM256Q8N2U0 113 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
PDLIM7-216ENST00000506537 CTXND1A0A1B0GTU2 59 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 TMEM189A5PLL7 270 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 KLLNB2CW77 178 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 CXorf1O96002 111 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 AZU1P20160 251 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 CSN1S1P47710 185 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 C12orf74Q32Q52 190 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 Q6ZTC4 211 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 Q8TAT8 98 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 LINC01587Q99440 93 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
PDLIM7-216ENST00000506537 A0A1B0GVG6 124 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 CRISP2P16562 243 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 CD300CQ08708 224 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 PRR9Q5T870 116 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 ZFAND2AQ8N6M9 145 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 C20orf144Q9BQM9 153 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 DKK2Q9UBU2 259 aa13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 YTHDF2Q9Y5A9 579 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-216ENST00000506537 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 H7BYZ3 331 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 C1QBP02746 253 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 SLC25A5P05141 298 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 FHITP49789 147 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 ZNF138P52744 262 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 TAS2R60P59551 318 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 GNG5P63218 68 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 AKAP14Q86UN6 197 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 RXFP4Q8TDU9 374 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 RPH3ALQ9UNE2 315 aa13.03□□□□□ -0.32
PDLIM7-216ENST00000506537 C7orf71A4D174 169 aa13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 GGTLC3B5MD39 225 aa13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 PFDN1O60925 122 aa13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 FGF8P55075 233 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 TMEM167BQ9NRX6 74 aa13.02□□□□□ -0.33
PDLIM7-216ENST00000506537 SPART-AS1P0CW21 52 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 HTN1P15515 57 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 FAM74A1Q5RGS3 127 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 Q6ZQT7 251 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 ARL6IP6Q8N6S5 226 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 CMTM2Q8TAZ6 248 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 HYDINQ4G0P3 5121 aa13.01□□□□□ -0.33
PDLIM7-216ENST00000506537 LCE6AA0A183 80 aa13□□□□□ -0.33
PDLIM7-216ENST00000506537 MAP1LC3B2A6NCE7 125 aa13□□□□□ -0.33
PDLIM7-216ENST00000506537 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
PDLIM7-216ENST00000506537 NMBP08949 121 aa13□□□□□ -0.33
PDLIM7-216ENST00000506537 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
PDLIM7-216ENST00000506537 STOML3Q8TAV4 291 aa13□□□□□ -0.33
PDLIM7-216ENST00000506537 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
PDLIM7-216ENST00000506537 MAP1LC3BQ9GZQ8 125 aa13□□□□□ -0.33
PDLIM7-216ENST00000506537 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
PDLIM7-216ENST00000506537 TRAV8-1A0A0A6YYK1 113 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 TRBV7-9A0A0J9YWB2 115 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 GPX1P07203 203 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 C5orf17Q8NAS9 161 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 C16orf74Q96GX8 76 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
PDLIM7-216ENST00000506537 TRAV10A0A0B4J240 114 aa12.98□□□□□ -0.33
PDLIM7-216ENST00000506537 TEX48A0A1B0GUV7 120 aa12.98□□□□□ -0.33
PDLIM7-216ENST00000506537 C11orf94C9JXX5 98 aa12.98□□□□□ -0.33
PDLIM7-216ENST00000506537 TPT1P13693 172 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-216ENST00000506537 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-216ENST00000506537 A0A1W2PRE2 83 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 UMAD1C9J7I0 102 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 TCRAP04437 139 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 UBE2G2P60604 165 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 EIF5AP63241 154 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 C2CD4CQ8TF44 421 aa12.97□□□□□ -0.33
PDLIM7-216ENST00000506537 TVP23CQ96ET8 276 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms