RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 TSPOP30536 169 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
SMN1-204ENST00000506163 PGPA6NDG6 321 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 HMSDA8MTL9 139 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 KLLNB2CW77 178 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TAAR5O14804 337 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 JTBO76095 146 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 HTN1P15515 57 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TAS2R60P59551 318 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 CD300CQ08708 224 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 Q6ZQT7 251 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 SUN5Q8TC36 379 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.38
SMN1-204ENST00000506163 TRAV12-3A0A0B4J271 114 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 MBP02144 154 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 GCHFRP30047 84 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 LEPP41159 167 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 PRR9Q5T870 116 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 H7BYZ3 331 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ZNF324O75467 553 aaPredicted RBP12.69□□□□□ -0.38
SMN1-204ENST00000506163 CRISP2P16562 243 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ZNF345Q14585 488 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 Q8TAT8 98 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 HYLS1Q96M11 299 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ACTR3CQ9C0K3 210 aaPredicted RBP12.69□□□□□ -0.38
SMN1-204ENST00000506163 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
SMN1-204ENST00000506163 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 IGLL5B9A064 214 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
SMN1-204ENST00000506163 CSN1S1P47710 185 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 ZNF138P52744 262 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
SMN1-204ENST00000506163 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 C7orf71A4D174 169 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 GNG5P63218 68 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 TMPRSS5Q9H3S3 457 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 A0A0D9SG52 128 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 CXorf1O96002 111 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 NMBP08949 121 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 FHITP49789 147 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 TVP23CQ96ET8 276 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 GGTLC3B5MD39 225 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 BCL2L11O43521 198 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 GPX1P07203 203 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 FGF8P55075 233 aaPredicted RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 TCTE3Q8IZS6 198 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 CMTM2Q8TAZ6 248 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 hCG_2014768A0A024R1R8 64 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LY6G6CO95867 125 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DAD1P61803 113 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LGALSLQ3ZCW2 172 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 SUMO1P63165 101 aaKnown RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 ZNF471Q9BX82 626 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 HTN3P15516 51 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms