RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 OR4A5Q8NH83 315 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PFN4Q8NHR9 129 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SGMS2Q8NHU3 365 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TOMM6Q96B49 74 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CMBLQ96DG6 245 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C12orf57Q99622 126 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 MND1Q9BWT6 205 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC00470Q9BZP3 86 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR2J1Q9GZK6 312 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 YIPF3Q9GZM5 350 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 DUSP21Q9H596 190 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RBM7Q9Y580 266 aaKnown RBP2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CSPG4Q6UVK1 2322 aa2.9□□□□□ -1.95
PDLIM1P4-201ENST00000504327 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR5H14A6NHG9 310 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAF3IP2O43734 574 aaPredicted RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IFNA10P01566 189 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF823P16415 610 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ELK1P19419 428 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NPY1RP25929 384 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CD200P41217 278 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GABRA2P47869 451 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PRRC2AP48634 2157 aaKnown RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TAS2R45P59539 299 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 FGF12P61328 243 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PRSS54Q6PEW0 395 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CNEP1R1Q8N9A8 125 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BPIFB6Q8NFQ5 453 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR10D4PQ8NGN7 298 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC01006Q8NI28 216 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC01560Q8TB33 94 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TMEM158Q8WZ71 300 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RNASE6Q93091 150 aaKnown RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GGACTQ9BVM4 153 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C1QTNF6Q9BXI9 259 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF286AQ9HBT8 521 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AMMECR1Q9Y4X0 333 aaPredicted RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 U3KQ87 197 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PKD1L1Q8TDX9 2849 aa2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HEATR1Q9H583 2144 aaKnown RBP2.89□□□□□ -1.95
PDLIM1P4-201ENST00000504327 JMJD1CQ15652 2540 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 MED13LQ71F56 2210 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 STAB1Q9NY15 2570 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF670-ZNF695F2Z2N8 137 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RPL36A-HNRNPH2H7BZ11 118 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 K7ERS5 55 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CDS2O95674 445 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HLA-DQA1P01909 254 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SRP19P09132 144 aaKnown RBP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BCL2P10415 239 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 COX6B1P14854 86 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 EVI2AP22794 236 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LPAR6P43657 344 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AKR1C2P52895 323 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TMBIM6P55061 237 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 WNT4P56705 351 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 FXYD6P3P58550 94 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RRAS2P62070 204 aaPredicted RBP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RPS11P62280 158 aaKnown RBP eCLIP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ENDOGQ14249 297 aaKnown RBP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C10orf128Q5T292 105 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 FAM27BQ5VT28 67 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AAED1Q7RTV5 226 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR8I2Q8N0Y5 310 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC00612Q8N6U2 182 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF709Q8N972 641 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR8D4Q8NGM9 314 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR4K13Q8NH42 304 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RTL8AQ9BWD3 113 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PLA2G12AQ9BZM1 189 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR2H1Q9GZK4 316 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IFI27L2Q9H2X8 130 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TP53TG3Q9ULZ0 132 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NIPBLQ6KC79 2804 aaeCLIP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NSD1Q96L73 2696 aaPredicted RBP2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AKAP9Q99996 3911 aa2.88□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SONP18583 2426 aaKnown RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGHV3-43A0A0B4J1X8 118 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAV5A0A0B4J249 113 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAV38-1A0A0B4J264 116 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IZUMO1RA6ND01 250 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TMEM212A6NML5 194 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 DEFB108AA8MXU0 73 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGLL5B9A064 214 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C9JAW5 83 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C9JCJ5 164 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 J3QRE1 110 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 K7ERU9 68 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 M0R2Z0 102 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 UBE2L6O14933 153 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SLC22A1O15245 554 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PLA2G10O15496 165 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 UBL3O95164 117 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HLA-DQB1P01920 261 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms