RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 DTX2Q86UW9 622 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 CRPP02741 224 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 ZNF134P52741 427 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 C8orf49Q96NF6 230 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 TRGV1A0A0A0MS02 117 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 OVOL3O00110 214 aa12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 DUX4L9Q6RFH8 374 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-202ENST00000503427 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 TECTAO75443 2155 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 CKS1BP61024 79 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 Q8N8P6 123 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 ZGRF1Q86YA3 2104 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.91□□□□□ -0.349e-7■■■■■ 30.1
HMGXB3-202ENST00000503427 A0A087WWL8 130 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 LY6G5BQ8NDX9 201 aa12.91□□□□□ -0.34
HMGXB3-202ENST00000503427 Q5PR19 223 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 ZFAND6Q6FIF0 208 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 SPRY4Q9C004 299 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 SAP30O75446 220 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 THAP8Q8NA92 274 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 INSP01308 110 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 PRR20EP86478 221 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 PRR20CP86479 221 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 PRR20DP86480 221 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 PRR20BP86481 221 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 PRR20AP86496 221 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 TIMM21Q9BVV7 248 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 MYMXA0A1B0GTQ4 84 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 H3BRN7 92 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 NPC2P61916 151 aa12.9□□□□□ -0.34
HMGXB3-202ENST00000503427 MMP23AO75900 390 aa12.9□□□□□ -0.35
HMGXB3-202ENST00000503427 PRR25Q96S07 402 aa12.9□□□□□ -0.35
HMGXB3-202ENST00000503427 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 C2orf82Q6UX34 121 aa12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 J3QLI3 93 aa12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 RNF166Q96A37 237 aaPredicted RBP12.89□□□□□ -0.35
HMGXB3-202ENST00000503427 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 A0A087WX48 190 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 S100A7L2Q5SY68 101 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
HMGXB3-202ENST00000503427 PAX4O43316 350 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 K7EM74 188 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 Q6ZSR3 168 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 SHISA9B4DS77 424 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 PRB1P04280 392 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 KRTAP27-1Q3LI81 207 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 C8orf31Q8N9H6 132 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 TMEM141Q96I45 108 aa12.87□□□□□ -0.35
HMGXB3-202ENST00000503427 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 IGLL1P15814 213 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 SPXQ9BT56 116 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 TPSG1Q9NRR2 321 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 DKK4Q9UBT3 224 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 TP53TG1Q9Y2A0 90 aa12.86□□□□□ -0.35
HMGXB3-202ENST00000503427 COX8AP10176 69 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 OVOL2Q9BRP0 275 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 LGALS1P09382 135 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 JPT2Q9H910 190 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 RNF114Q9Y508 228 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 PRSS57Q6UWY2 283 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 C11orf53Q8IXP5 236 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
HMGXB3-202ENST00000503427 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 G3V318 75 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 RHODO00212 210 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 LEPROTO15243 131 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 ACACBO00763 2458 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 ZC2HC1AQ96GY0 325 aa12.84□□□□□ -0.35
HMGXB3-202ENST00000503427 PRIMA1Q86XR5 153 aa12.83□□□□□ -0.35
HMGXB3-202ENST00000503427 LYPD6Q86Y78 171 aa12.83□□□□□ -0.35
HMGXB3-202ENST00000503427 CST9LQ9H4G1 147 aa12.83□□□□□ -0.35
HMGXB3-202ENST00000503427 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.35
HMGXB3-202ENST00000503427 OCIAD2Q56VL3 154 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms