RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 IGKV2D-40P01614 121 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 IGLV2-8P01709 118 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF138P52744 262 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 SRSF2Q01130 221 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 CT83Q5H943 113 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 IBA57Q5T440 356 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 ADAMTSL5Q6ZMM2 481 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 RNF182Q8N6D2 247 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 OR4B1Q8NGF8 309 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 OR8A1Q8NGG7 326 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 TMEM158Q8WZ71 300 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 TRAV9-1A0A075B6T8 112 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 XKRY2A2RUG3 117 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 PGPEP1LA6NFU8 196 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF705GA8MUZ8 300 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 SAP30O75446 220 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 P01737 135 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 HLA-DMBP28068 263 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 CD300EQ496F6 205 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 SMUG1Q53HV7 270 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 IGFL4Q6B9Z1 124 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 TMEM88Q6PEY1 159 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 FOXI2Q6ZQN5 318 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 C20orf173Q96LM9 149 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 PRR25Q96S07 402 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 ASCL2Q99929 193 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 MCRIP2Q9BUT9 160 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF747Q9BV97 191 aa6.11□□□□□ -1.43
TOPBP1-202ENST00000503338 C19orf71A6NCJ1 209 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 A8MWL6 223 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 GATCO43716 136 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF688P0C7X2 276 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 EDN2P20800 178 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 TFPI2P48307 235 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 OR5I1Q13606 314 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 PSMG4Q5JS54 123 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 PRR27Q6MZM9 219 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 SHISA2Q6UWI4 295 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 CBLN2Q8IUK8 224 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 SGK494Q96LW2 274 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 VGLL1Q99990 258 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 FAM110AQ9BQ89 295 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 SAV1Q9H4B6 383 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 AURKAIP1Q9NWT8 199 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 IL36BQ9NZH7 164 aa6.1□□□□□ -1.43
TOPBP1-202ENST00000503338 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 IGLV1-51P01701 117 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 TSPOP30536 169 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 LEPP41159 167 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 RPS20P60866 119 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 ERCC8Q13216 396 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 C9orf66Q5T8R8 295 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 Q6AWC8 147 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 C12orf54Q6X4T0 127 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 NUDT10Q8NFP7 164 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 NUDT11Q96G61 164 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 GPR61Q9BZJ8 451 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 GFRA4Q9GZZ7 299 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 V9GYV3 84 aa6.09□□□□□ -1.43
TOPBP1-202ENST00000503338 TRBV24-1A0A075B6N3 115 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 A0A0J9YX75 114 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 CRISP2P16562 243 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 ELOBQ15370 118 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 COX19Q49B96 90 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 C3orf56Q8N813 242 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 Q8TAT8 98 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 TSKUQ8WUA8 353 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 ZC2HC1AQ96GY0 325 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 CLUHP3Q96NS8 147 aa6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-202ENST00000503338 TRAV21A0A0B4J279 112 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 COLCA2A8K830 154 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 OR11H12B2RN74 326 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 HLA-DRB4P13762 266 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 CD33P20138 364 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 DEFB131AP59861 70 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 APRG1Q8IVJ8 170 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 FAM24BQ8N5W8 94 aa6.07□□□□□ -1.44
TOPBP1-202ENST00000503338 WFDC9Q8NEX5 89 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms