RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 HIVEP2P31629 2446 aa2.57□□□□□ -2
HMGB1P3-201ENST00000502802 A0A1W2PQD3 144 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 C11orf86A6NJI1 115 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 KPNA4O00629 521 aaPredicted RBP2.56□□□□□ -2
HMGB1P3-201ENST00000502802 GNRH2O43555 120 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 IFNA4P05014 189 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 IFI30P13284 250 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 FXYD7P58549 80 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 RPL30P62888 115 aaKnown RBP2.56□□□□□ -2
HMGB1P3-201ENST00000502802 PSPHP78330 225 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 FOXF1Q12946 379 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 EDDM3AQ14507 147 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 NNATQ16517 81 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 LCE3AQ5TA76 89 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 GLT8D1Q68CQ7 371 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 DHRS4L2Q6PKH6 230 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 RPS27LQ71UM5 84 aaKnown RBP2.56□□□□□ -2
HMGB1P3-201ENST00000502802 IFT20Q8IY31 132 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 OR4K15Q8NH41 348 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 GRPEL2Q8TAA5 225 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 ZHX1-C8orf76Q96EF9 292 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 C12orf57Q99622 126 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 DOHHQ9BU89 302 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 YIPF3Q9GZM5 350 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 SPANXCQ9NY87 97 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 PCTPQ9UKL6 214 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 PKIGQ9Y2B9 76 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 FBN3Q75N90 2809 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 SVEP1Q4LDE5 3571 aa2.56□□□□□ -2
HMGB1P3-201ENST00000502802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P3-201ENST00000502802 STAB1Q9NY15 2570 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 KNCNA6PVL3 124 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 LINC00587B1AMM8 73 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 TPST1O60507 370 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 ZNF728P0DKX0 622 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 RPL5P46777 297 aaKnown RBP2.55□□□□□ -2
HMGB1P3-201ENST00000502802 TMEM42Q69YG0 159 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 SLC48A1Q6P1K1 146 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 SSX8Q7RTT4 187 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 COMMD6Q7Z4G1 85 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 ANGPTL5Q86XS5 388 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 C20orf196Q8IYI0 205 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 WFDC11Q8NEX6 87 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 ZNF675Q8TD23 568 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 DGCR14Q96DF8 476 aaKnown RBP2.55□□□□□ -2
HMGB1P3-201ENST00000502802 SERPINI1Q99574 410 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 SMR3AQ99954 134 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 ZNF471Q9BX82 626 aaPredicted RBP2.55□□□□□ -2
HMGB1P3-201ENST00000502802 TPT1P8Q9HAU6 139 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 GLTPQ9NZD2 209 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 UTP11Q9Y3A2 253 aaKnown RBP2.55□□□□□ -2
HMGB1P3-201ENST00000502802 HSPB11Q9Y547 144 aa2.55□□□□□ -2
HMGB1P3-201ENST00000502802 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 NBEAL1Q6ZS30 2694 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 TMEM269A0A1B0GVZ9 245 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 A8MT66 165 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 K7EP13 123 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 SRP19P09132 144 aaKnown RBP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 FUSP35637 526 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 SNRPD2P62316 118 aaKnown RBP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 PLCXD2Q0VAA5 305 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 DEFB113Q30KQ7 82 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 LPCAT3Q6P1A2 487 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 PP632Q6XCG6 107 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 ZNF767PQ75MW2 155 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 LRRC28Q86X40 367 aaPredicted RBP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 OR52R1Q8NGF1 315 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 PFDN5Q99471 154 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 PHB2Q99623 299 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 MRPL57Q9BQC6 102 aaKnown RBP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 XAGE1AQ9HD64 81 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 BIN3Q9NQY0 253 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 MRPL27Q9P0M9 148 aaKnown RBP2.54□□□□□ -2
HMGB1P3-201ENST00000502802 WNK2Q9Y3S1 2297 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 PKD1L1Q8TDX9 2849 aa2.54□□□□□ -2
HMGB1P3-201ENST00000502802 A0A087WUJ7 227 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 DEFB108AA8MXU0 73 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 PPP5D1E7EU14 171 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 C3orf84H3BNL1 204 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 I3L521 148 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 HLA-DRB1P01911 266 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 TTRP02766 147 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 UCHL1P09936 223 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 ZNF705DP0CH99 300 aaPredicted RBP2.53□□□□□ -2
HMGB1P3-201ENST00000502802 DSCR4P56555 118 aaPredicted RBP2.53□□□□□ -2
HMGB1P3-201ENST00000502802 RPS20P60866 119 aaKnown RBP2.53□□□□□ -2
HMGB1P3-201ENST00000502802 AKR1C1Q04828 323 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 GRK1Q15835 563 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 MIAQ16674 131 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 TMEM97Q5BJF2 176 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 SCIMPQ6UWF3 145 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 Q6ZS49 121 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 LHFPL1Q86WI0 220 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 MMGT1Q8N4V1 131 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 OR10X1Q8NGY0 326 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 PPP3R2Q96LZ3 170 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 HOPXQ9BPY8 73 aaPredicted RBP2.53□□□□□ -2
HMGB1P3-201ENST00000502802 DCSTAMPQ9H295 470 aa2.53□□□□□ -2
HMGB1P3-201ENST00000502802 NMNAT1Q9HAN9 279 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms