RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 WDR97A6NE52 1622 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 MAP1LC3B2A6NCE7 125 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 PRORSD1PA6NEY8 169 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 SULT1C4O75897 302 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 RPL37AP61513 92 aaKnown RBP0.39□□□□□ -2.35
PSPC1-205ENST00000497722 MRPS36P82909 103 aaKnown RBP0.39□□□□□ -2.35
PSPC1-205ENST00000497722 DCUN1D2Q6PH85 259 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 ANGPTL5Q86XS5 388 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 FAM24BQ8N5W8 94 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 OR4B1Q8NGF8 309 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 ISOC1Q96CN7 298 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 CCL19Q99731 98 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 ATPIF1Q9UII2 106 aa0.39□□□□□ -2.35
PSPC1-205ENST00000497722 FER1L6Q2WGJ9 1857 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 CTTNBP2Q8WZ74 1663 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 A0A1W2PRE2 83 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 GABARAPH6UMI1 98 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 KPNA4O00629 521 aaPredicted RBP0.38□□□□□ -2.35
PSPC1-205ENST00000497722 PRH1P02810 166 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 BCL2P10415 239 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 FABP2P12104 132 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 CCL4P13236 92 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 STX12Q86Y82 276 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.38□□□□□ -2.35
PSPC1-205ENST00000497722 OR5AK2Q8NH90 309 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 RMND5BQ96G75 393 aaPredicted RBP0.38□□□□□ -2.35
PSPC1-205ENST00000497722 SMR3AQ99954 134 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 LIMD2Q9BT23 127 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 NAT8BQ9UHF3 227 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 BCL9O00512 1426 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 FAM135BQ49AJ0 1406 aa0.38□□□□□ -2.35
PSPC1-205ENST00000497722 TRBV7-6A0A0J9YX20 115 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 A0A0J9YY99 117 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 C3orf85A0A1B0GTC6 90 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 A6NN06 94 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 BBIP1A8MTZ0 92 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 PFDN1O60925 122 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 FABP1P07148 127 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 FABP4P15090 132 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 TFAMQ00059 246 aaKnown RBP0.37□□□□□ -2.35
PSPC1-205ENST00000497722 TOMM20LQ6UXN7 152 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 ZCCHC23Q6ZST2 131 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 C3orf62Q6ZUJ4 267 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 THEM6Q8WUY1 208 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 DDA1Q9BW61 102 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 LAMTOR2Q9Y2Q5 125 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 V9GYQ6 96 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.37□□□□□ -2.35
PSPC1-205ENST00000497722 KCPQ6ZWJ8 1503 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 DLC1Q96QB1 1528 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 ZGRF1Q86YA3 2104 aa0.37□□□□□ -2.35
PSPC1-205ENST00000497722 ANK1P16157 1881 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 TRBV27A0A0K0K1C4 114 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 A0A1B0GV72 72 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 E7EQ34 232 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 FAM107AO95990 144 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 S100A11P31949 105 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 POLR2HP52434 150 aaKnown RBP0.36□□□□□ -2.35
PSPC1-205ENST00000497722 NDUFA6P56556 154 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 SNRPD3P62318 126 aaKnown RBP0.36□□□□□ -2.35
PSPC1-205ENST00000497722 C10orf111Q8N326 155 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 PLAC4Q8WY50 150 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 CCDC32Q9BV29 185 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 MED31Q9Y3C7 131 aa0.36□□□□□ -2.35
PSPC1-205ENST00000497722 XIRP1Q702N8 1843 aaKnown RBP0.36□□□□□ -2.35
PSPC1-205ENST00000497722 ARAP1Q96P48 1450 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 NEFHP12036 1026 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 PDE6GP18545 87 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 RPS3P23396 243 aaKnown RBP eCLIP0.35□□□□□ -2.35
PSPC1-205ENST00000497722 SDC2P34741 201 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 CAV3P56539 151 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 IZUMO2Q6UXV1 221 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 MORN4Q8NDC4 146 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 OR5H6Q8NGV6 325 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 PRELID3AQ96N28 172 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 MUC4Q99102 2169 aa0.35□□□□□ -2.35
PSPC1-205ENST00000497722 USP24Q9UPU5 2620 aa0.34□□□□□ -2.35
PSPC1-205ENST00000497722 LOC107984156A0A0G2JMH3 177 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 PGRMC1O00264 195 aaKnown RBP0.34□□□□□ -2.36
PSPC1-205ENST00000497722 IGHV3-30P01768 117 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 TRACP01848 142 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 SAA1P0DJI8 122 aaPredicted RBP0.34□□□□□ -2.36
PSPC1-205ENST00000497722 IGHV3-30-5P0DP03 117 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 TPT1P13693 172 aaKnown RBP0.34□□□□□ -2.36
PSPC1-205ENST00000497722 SRP9P49458 86 aaKnown RBP0.34□□□□□ -2.36
PSPC1-205ENST00000497722 MAXP61244 160 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 HRCT1Q6UXD1 115 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 LINC00305Q7Z4B0 112 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 ARL17AQ8IVW1 177 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
PSPC1-205ENST00000497722 A2MP01023 1474 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 TANC2Q9HCD6 1990 aa0.34□□□□□ -2.36
PSPC1-205ENST00000497722 ZNF462Q96JM2 2506 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 MYH1P12882 1939 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 MUC5BQ9HC84 5762 aaPredicted RBP0.33□□□□□ -2.36
PSPC1-205ENST00000497722 TRAV13-1A0A0B4J241 112 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 LOC107984640A0A0U1RRK4 108 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 ARL5CA6NH57 179 aa0.33□□□□□ -2.36
PSPC1-205ENST00000497722 IFNA21P01568 189 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms