RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-210	ENST00000497638	TBP	P20226	339 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	GATA2	P23769	480 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	GABARAPL2	P60520	117 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	RAB11A	P62491	216 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	LAGE3	Q14657	143 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	IBA57	Q5T440	356 aa	Known RBP	4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	LCN15	Q6UWW0	184 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	TERB2	Q8NHR7	220 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	CIRBP-AS1	Q8TBR5	109 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	TMEM37	Q8WXS4	190 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	SLC50A1	Q9BRV3	221 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	MRPL32	Q9BYC8	188 aa	Known RBP	4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	RBKS	Q9H477	322 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	NAA60	Q9H7X0	242 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	DNAJC4	Q9NNZ3	241 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	RNF24	Q9Y225	148 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	HIGD1A	Q9Y241	93 aa		4.96	□□□□□ -1.62
VPS45-210	ENST00000497638	SMIM31	A0A1B0GVY4	71 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638		E5RGE8	158 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638		J3KRW8	73 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	SLC25A5	P05141	298 aa	Known RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	CCR6	P51684	374 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	HNRNPA3	P51991	378 aa	Known RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	KRTAP10-5	P60370	271 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	WFDC2	Q14508	124 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	SMCO1	Q147U7	214 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	SH2D6	Q7Z4S9	175 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	SNX29P2	Q8IUI4	249 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	EIF4E3	Q8N5X7	224 aa	Known RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	ZNF431	Q8TF32	576 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	C14orf166	Q9Y224	244 aa	Known RBP	4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	KLF12	Q9Y4X4	402 aa		4.95	□□□□□ -1.62
VPS45-210	ENST00000497638	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	TRGV4	A0A0C4DH28	118 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	C7orf71	A4D174	169 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	CRYM-AS1	A6NIL9	109 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638		C9JCJ5	164 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	HYPM	O75409	117 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	APOA1	P02647	267 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	CD3D	P04234	171 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	PRB4	P10163	310 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	AKR1C4	P17516	323 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	AKR1C1	Q04828	323 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	SCGB2B2	Q4G0G5	96 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS45-210	ENST00000497638		Q6ZRU5	148 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	ACOT7L	Q6ZUV0	252 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	IQCF2	Q8IXL9	164 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	MARCH1	Q8TCQ1	289 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	BLNK	Q8WV28	456 aa		4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	MRPL16	Q9NX20	251 aa	Known RBP	4.94	□□□□□ -1.62
VPS45-210	ENST00000497638	TRAV8-6	A0A0B4J262	113 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638		A0A0B4J2A0	478 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	LINC00854	A0A1B0GVQ3	168 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PMS2P5	A8MQ11	134 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PRAC2	D3DTV9	90 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PRSS46	E5RG02	174 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	MRPS12	O15235	138 aa	Known RBP	4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	OR5G3	P0C626	314 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	CT45A10	P0DMU9	189 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PPT1	P50897	306 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PLP1	P60201	277 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	SURF2	Q15527	256 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	LINC01620	Q4KN68	170 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	CNBD2	Q96M20	576 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	SLC25A31	Q9H0C2	315 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	SHPK	Q9UHJ6	478 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PAIP2B	Q9ULR5	123 aa	Known RBP	4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	PXMP4	Q9Y6I8	212 aa		4.93	□□□□□ -1.62
VPS45-210	ENST00000497638	RBFOX3	A6NFN3	312 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	KLLN	B2CW77	178 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	LECT2	O14960	151 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	MPDU1	O75352	247 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	IL5	P05113	134 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	LINC00869	P0C866	280 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	ANXA7	P20073	488 aa	Known RBP	4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	SELENOT	P62341	195 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	RPP30	P78346	268 aa	Known RBP	4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	ZNF846	Q147U1	533 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	CYP2G1P	Q6ZSU1	146 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	OR10G4	Q8NGN3	311 aa		4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	CIB3	Q96Q77	187 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS45-210	ENST00000497638	TRAV8-3	A0A0A6YYJ7	113 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	PIGBOS1	A0A0B4J2F0	54 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	MED6	O75586	246 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	RAB3D	O95716	219 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	IAPP	P10997	89 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	AMT	P48728	403 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	TAS2R19	P59542	299 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	OR10J3	Q5JRS4	329 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638		Q8N976	141 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	NHLRC2	Q8NBF2	726 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	OR4D10	Q8NGI6	311 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	ARPC5L	Q9BPX5	153 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	PAXX	Q9BUH6	204 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	MTFP1	Q9UDX5	166 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	KCNIP3	Q9Y2W7	256 aa		4.91	□□□□□ -1.62
VPS45-210	ENST00000497638	IGHV1OR15-1	A0A075B7D0	117 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms