RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MIR17HGQ75NE6 70 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 BLNKQ8WV28 456 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 SLC25A31Q9H0C2 315 aa9.97□□□□□ -0.81
VTI1A-209ENST00000496445 KLLNB2CW77 178 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 RLN2P04090 185 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 HOXA5P20719 270 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 ATG101Q9BSB4 218 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
VTI1A-209ENST00000496445 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 TIMM9Q9Y5J7 89 aa9.96□□□□□ -0.82
VTI1A-209ENST00000496445 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-209ENST00000496445 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-209ENST00000496445 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
VTI1A-209ENST00000496445 CD300CQ08708 224 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 BTN1A1Q13410 526 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 PRR9Q5T870 116 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 CCDC28AQ8IWP9 274 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 PPP1R1CQ8WVI7 109 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 FXYD5Q96DB9 178 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 PYGO2Q9BRQ0 406 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 MARVELD1Q9BSK0 173 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 PRELID1Q9Y255 219 aa9.95□□□□□ -0.82
VTI1A-209ENST00000496445 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 GAGE12BA1L429 117 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 C7orf71A4D174 169 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-209ENST00000496445 GAGE7O76087 117 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 GAGE12FP0CL80 117 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 GAGE12GP0CL81 117 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 GAGE12IP0CL82 117 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
VTI1A-209ENST00000496445 ICAM4Q14773 271 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 FAM122CQ6P4D5 195 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 Q6ZTI0 123 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 PHYHIPLQ96FC7 376 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 LINC00477Q96M19 166 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 VGLL1Q99990 258 aa9.94□□□□□ -0.82
VTI1A-209ENST00000496445 MRPL32Q9BYC8 188 aaKnown RBP9.94□□□□□ -0.82
VTI1A-209ENST00000496445 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 OR10J4P0C629 311 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 CRISP2P16562 243 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 DAZ2Q13117 558 aaKnown RBP9.93□□□□□ -0.82
VTI1A-209ENST00000496445 OR5I1Q13606 314 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 C1orf134Q5TEV5 83 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 Q6ZQT7 251 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 ZNF503Q96F45 646 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 ATP5SQ99766 215 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 OR51M1Q9H341 326 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 AAMDCQ9H7C9 122 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 KCNIP2Q9NS61 270 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 FUT9Q9Y231 359 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 HSPB11Q9Y547 144 aa9.93□□□□□ -0.82
VTI1A-209ENST00000496445 A0A0J9YY99 117 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 MPC2O95563 127 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 NBEAP1P0C6P0 100 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 M6PRP20645 277 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 SOHLH1Q5JUK2 328 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
VTI1A-209ENST00000496445 GSN-AS1Q9NRJ2 163 aa9.92□□□□□ -0.82
VTI1A-209ENST00000496445 SSNA1O43805 119 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
VTI1A-209ENST00000496445 CCL18P55774 89 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 ANXA2RQ3ZCQ2 193 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 SSX7Q7RTT5 188 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 EIF4E3Q8N5X7 224 aaKnown RBP9.91□□□□□ -0.82
VTI1A-209ENST00000496445 Q8TAT8 98 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 ZNF492Q9P255 531 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 MUC4Q99102 2169 aa9.91□□□□□ -0.82
VTI1A-209ENST00000496445 C17orf112F2Z3M2 114 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 GPX1P07203 203 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 NMBP08949 121 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 ZNF575Q86XF7 245 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 MBD2Q9UBB5 411 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
VTI1A-209ENST00000496445 OR7C2O60412 319 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 SPINK4O60575 86 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 EIF3GO75821 320 aaKnown RBP eCLIP9.89□□□□□ -0.83
VTI1A-209ENST00000496445 PET100P0DJ07 73 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 MED14OSP0DP75 135 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
VTI1A-209ENST00000496445 TCL1AP56279 114 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 DEFA1P59665 94 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 DEFA3P59666 94 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
VTI1A-209ENST00000496445 TNP2Q05952 138 aa9.89□□□□□ -0.83
VTI1A-209ENST00000496445 FFAR4Q5NUL3 377 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms