RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 SSX9Q7RTT3 188 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 TMEM183AQ8IXX5 376 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 HIST3H2BBQ8N257 126 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 OR11H1Q8NG94 326 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 OR1N2Q8NGR9 330 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 C4orf3Q8WVX3 66 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 SRSF12Q8WXF0 261 aaKnown RBP3.45□□□□□ -1.86
RBM39-240ENST00000495293 FRZBQ92765 325 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 HIST1H2BHQ93079 126 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 IMMP2LQ96T52 175 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 HIST1H2BNQ99877 126 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 HIST1H2BMQ99879 126 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 HINT2Q9BX68 163 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 VSIRQ9H7M9 311 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 PLEKHA3Q9HB20 300 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 NPVFQ9HCQ7 196 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 THYN1Q9P016 225 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 PRNDQ9UKY0 176 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 TRAPPC1Q9Y5R8 145 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 RFNGQ9Y644 331 aa3.45□□□□□ -1.86
RBM39-240ENST00000495293 TRAV9-1A0A075B6T8 112 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 LINC00587B1AMM8 73 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 LINC01619G3V211 115 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 RAMP3O60896 148 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 APOHP02749 345 aaPredicted RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 CRYGBP07316 175 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 OR9G9P0C7N8 305 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 CFC1BP0CG36 223 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 CFC1P0CG37 223 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 APELAP0DMC3 54 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 HIST1H1BP16401 226 aaKnown RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 NPY1RP25929 384 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 RPL27AP46776 148 aaKnown RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 CRIP2P52943 208 aaPredicted RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 HERV-K104P63124 156 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 ERHP84090 104 aaKnown RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 ZNF90Q03938 601 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 ATP5G2Q06055 141 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 EIF4EBP1Q13541 118 aaPredicted RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 TIGITQ495A1 244 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 COX19Q49B96 90 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 SPINK9Q5DT21 86 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 FAM78BQ5VT40 261 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 FAM159AQ6UWV7 190 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 VKORC1L1Q8N0U8 176 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 RPP25LQ8N5L8 163 aaKnown RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 ZNF491Q8N8L2 437 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 WFDC9Q8NEX5 89 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 OR10G8Q8NGN5 311 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 OR1P1Q8NH06 330 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 TMEM167AQ8TBQ9 72 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 USMG5Q96IX5 58 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 RNF2Q99496 336 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 PARLQ9H300 379 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 ZNF430Q9H8G1 570 aaPredicted RBP3.44□□□□□ -1.86
RBM39-240ENST00000495293 TMEM167BQ9NRX6 74 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 BET1LQ9NYM9 111 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 PXMP4Q9Y6I8 212 aa3.44□□□□□ -1.86
RBM39-240ENST00000495293 ANK2Q01484 3957 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 FAM223BA6NKX1 122 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 ZNF705FA8MVS1 300 aaPredicted RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 FNDC10F2Z333 226 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 G3V4G9 280 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 UPK2O00526 184 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 PHOX2AO14813 284 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 BRI3O95415 125 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 IGHV3-11P01762 117 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 PFN1P07737 140 aaKnown RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 LGALS1P09382 135 aaKnown RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 ZNF705DP0CH99 300 aaPredicted RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 ZNF705BP0CI00 300 aaPredicted RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 IGLL1P15814 213 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 GNG4P50150 75 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 HSPE1P61604 102 aaKnown RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 RANP62826 216 aaKnown RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 NDPQ00604 133 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 ZNF726P1Q15940 193 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 POU2AF1Q16633 256 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 RPEL1Q2QD12 228 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 DEFB136Q30KP8 78 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 C9orf66Q5T8R8 295 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 BAGE3Q86Y29 109 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 BAGE2Q86Y30 109 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 FAM223AQ8IWN6 122 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 TTC9CQ8N5M4 171 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 OR51G1Q8NGK1 321 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 OR1L6Q8NGR2 347 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 OR1L4Q8NGR5 311 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 OR1L8Q8NGR8 309 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 OR4X1Q8NH49 305 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 PHLDA1Q8WV24 401 aaPredicted RBP3.43□□□□□ -1.86
RBM39-240ENST00000495293 SFRP2Q96HF1 295 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 SLC35E1Q96K37 410 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 YPEL4Q96NS1 127 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 DUX3Q96PT4 197 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 CHRDL1Q9BU40 450 aa3.43□□□□□ -1.86
RBM39-240ENST00000495293 SAMD10Q9BYL1 202 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms