RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RNF141Q8WVD5 230 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 MRPL53Q96EL3 112 aaKnown RBP8.83□□□□□ -1
HSPG2-212ENST00000493940 C16orf74Q96GX8 76 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 FAM210BQ96KR6 192 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 ATP5SQ99766 215 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 FUT9Q9Y231 359 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 TIMM9Q9Y5J7 89 aa8.83□□□□□ -1
HSPG2-212ENST00000493940 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
HSPG2-212ENST00000493940 A0A1B0GVY2 172 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 CBY3A6NI87 242 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 KLLNB2CW77 178 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 F5H768 121 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 HOXA5P20719 270 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 Q6ZR54 194 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 C9orf47Q6ZRZ4 202 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 ODF3Q96PU9 254 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 C20orf144Q9BQM9 153 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 PAXXQ9BUH6 204 aa8.82□□□□□ -1
HSPG2-212ENST00000493940 LEPP41159 167 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 PDE6HQ13956 83 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 ZNF493Q6ZR52 646 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 C11orf72Q8NBR9 251 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 TP53TG3Q9ULZ0 132 aa8.81□□□□□ -1
HSPG2-212ENST00000493940 GAGE12BA1L429 117 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 C7orf71A4D174 169 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 GAGE7O76087 117 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 ATP5G1P05496 136 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 GAGE12FP0CL80 117 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 GAGE12GP0CL81 117 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 GAGE12IP0CL82 117 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 CRISP2P16562 243 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 RNASE4P34096 147 aaKnown RBP8.8□□□□□ -1
HSPG2-212ENST00000493940 ATP5G3P48201 142 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 RANP62826 216 aaKnown RBP8.8□□□□□ -1
HSPG2-212ENST00000493940 Q6ZTI0 123 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 Q8TAT8 98 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 LINC00477Q96M19 166 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 MRPL32Q9BYC8 188 aaKnown RBP8.8□□□□□ -1
HSPG2-212ENST00000493940 GSN-AS1Q9NRJ2 163 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 PRELID1Q9Y255 219 aa8.8□□□□□ -1
HSPG2-212ENST00000493940 SLC25A5P05141 298 aaKnown RBP8.79□□□□□ -1
HSPG2-212ENST00000493940 LGALS9BQ3B8N2 356 aa8.79□□□□□ -1
HSPG2-212ENST00000493940 ZNF492Q9P255 531 aa8.79□□□□□ -1
HSPG2-212ENST00000493940 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
HSPG2-212ENST00000493940 C17orf112F2Z3M2 114 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 HMGB3O15347 200 aaKnown RBP8.78□□□□□ -1
HSPG2-212ENST00000493940 OR7C2O60412 319 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 NUDT3O95989 172 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 RAB2AP61019 212 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 RNF212Q495C1 297 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 Q9H3A6 140 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 AAMDCQ9H7C9 122 aa8.78□□□□□ -1
HSPG2-212ENST00000493940 A0A0J9YY99 117 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 GPX1P07203 203 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 C15orf53Q8NAA6 179 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 ZNRF2Q8NHG8 242 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 SCGB1C1Q8TD33 95 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 TMPRSS5Q9H3S3 457 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
HSPG2-212ENST00000493940 TRAV26-1A0A087WT03 109 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 DIRC3C9JPN6 131 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 G3V3Q6 166 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 PTTG1O95997 202 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 IFNA5P01569 189 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
HSPG2-212ENST00000493940 OR5I1Q13606 314 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 VSIG2Q96IQ7 327 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 LINC00467Q9BRT7 94 aa8.76□□□□□ -1.01
HSPG2-212ENST00000493940 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 PET100P0DJ07 73 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 M6PRP20645 277 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 ZNF138P52744 262 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
HSPG2-212ENST00000493940 ANXA2RQ3ZCQ2 193 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 TMEM78Q5T7P6 136 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
HSPG2-212ENST00000493940 MED28Q9H204 178 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 KCNIP2Q9NS61 270 aa8.75□□□□□ -1.01
HSPG2-212ENST00000493940 RNF222A6NCQ9 220 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 PGPA6NDG6 321 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 SPINK4O60575 86 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 ESRGQ1W209 222 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 MUC21Q5SSG8 566 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 HSD17B11Q8NBQ5 300 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 HYLS1Q96M11 299 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 AQP10Q96PS8 301 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 SH3BGRL3Q9H299 93 aa8.74□□□□□ -1.01
HSPG2-212ENST00000493940 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
HSPG2-212ENST00000493940 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms