RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 MSRB3Q8IXL7 192 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 DYNAPQ8N1N2 210 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 HIGD1CA8MV81 97 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 ZNF345Q14585 488 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 STPG4Q8N801 248 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 MRPL53Q96EL3 112 aaKnown RBP4.32□□□□□ -1.72
FN1-224ENST00000492816 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 U3KQK5 164 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 TMEM131Q92545 1883 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 HMX2A2RU54 273 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 C1QCP02747 245 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 CTSGP08311 255 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 LOXP28300 417 aaPredicted RBP4.32□□□□□ -1.72
FN1-224ENST00000492816 XCL1P47992 114 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 SLURP1P55000 103 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 PRR25Q96S07 402 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 ANK1P16157 1881 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 KMT2EQ8IZD2 1858 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 KIR2DL5BA0A0G2JN68 375 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 KIR2DL5BA0A0G2JPC4 375 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 IGKCP01834 107 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 AWAT1Q58HT5 328 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 NIT1Q86X76 327 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 KIR2DL5AQ8N109 375 aa4.32□□□□□ -1.72
FN1-224ENST00000492816 SMIM9A6NGZ8 99 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 YPEL3P61236 119 aaPredicted RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 TMEM170AQ8WVE7 144 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 TMEM141Q96I45 108 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 LTBP1Q14766 1721 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 A0A1B0GTL3 188 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 LINC00614P0C842 121 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 NANOS3P60323 173 aaKnown RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 HHLA3Q9XRX5 114 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 NLRC5Q86WI3 1866 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 C15orf62A8K5M9 175 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 SOCS3O14543 225 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 CRYGDP07320 174 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 IGFBP3P17936 291 aaPredicted RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 MGST2Q99735 147 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 TRAV8-4A0A0B4J246 113 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 NPC2P61916 151 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 DAZ2Q13117 558 aaKnown RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 DAZ4Q86SG3 579 aaKnown RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 DAZ3Q9NR90 486 aaKnown RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 LINC00474Q9P2X8 69 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 U3KQE9 123 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 TDRG1Q3Y452 100 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 TRBV5-7A0A0A0MS05 114 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 LHFPL4Q7Z7J7 247 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 A0A087WZ39 114 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 DEFB136Q30KP8 78 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 LINC00322Q6ZN03 302 aaPredicted RBP4.31□□□□□ -1.72
FN1-224ENST00000492816 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 RS1O15537 224 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 NXPH4O95158 308 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 GNG5P63218 68 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 CD177Q8N6Q3 437 aa4.31□□□□□ -1.72
FN1-224ENST00000492816 G3V318 75 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 J3QL48 77 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
FN1-224ENST00000492816 LAMTOR2Q9Y2Q5 125 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 HLA-DRB4X5D2U9 266 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 SPTAN1Q13813 2472 aaKnown RBP4.3□□□□□ -1.72
FN1-224ENST00000492816 LTAP01374 205 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 TRAV8-2A0A0B4J237 113 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 A0A1B0GV72 72 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 HGFACQ04756 655 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 OR11H6Q8NGC7 330 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 GPHA2Q96T91 129 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 CTAG1AP78358 180 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 SH2D1AO60880 128 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 C1orf229Q6ZS94 237 aaPredicted RBP4.3□□□□□ -1.72
FN1-224ENST00000492816 A0A0A6YYD4 124 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 TFF3Q07654 80 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
FN1-224ENST00000492816 ZNF837Q96EG3 531 aaPredicted RBP4.3□□□□□ -1.72
FN1-224ENST00000492816 NRGNQ92686 78 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 MESP1Q9BRJ9 268 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 K7EQD1 137 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 AMTNQ6UX39 209 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 NCOR1P1Q9H4R4 102 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 PPP1R3EQ9H7J1 279 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 GREB1Q4ZG55 1949 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 LYRM9A8MSI8 78 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 TBX6O95947 436 aaPredicted RBP4.29□□□□□ -1.72
FN1-224ENST00000492816 CFPP27918 469 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 FOXA3P55318 350 aaPredicted RBP4.29□□□□□ -1.72
FN1-224ENST00000492816 ZNF319Q9P2F9 582 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 SLC17A3O00476 420 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 GNB1LQ9BYB4 327 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 CENPVL3A0A0U1RRI6 287 aa4.29□□□□□ -1.72
FN1-224ENST00000492816 FAM229AH3BQW9 127 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms