RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TRAV13-1A0A0B4J241 112 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 TRBV7-6A0A0J9YX20 115 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 A0A0J9YY99 117 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 PRORSD1PA6NEY8 169 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 C5orf58C9J3I9 102 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 TPT1P13693 172 aaKnown RBP0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 RPS3P23396 243 aaKnown RBP eCLIP0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 FOXA3P55318 350 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 FXYD4P59646 89 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 SAMD13Q5VXD3 122 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 TEX29Q8N6K0 151 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 CCDC115Q96NT0 180 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 TRAPPC2LQ9UL33 140 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 ADGBQ8N7X0 1667 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 PEAK1Q9H792 1746 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 LAMA4Q16363 1823 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 MYLKQ15746 1914 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 CITO14578 2027 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 H0YJX3 145 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 CD14P08571 375 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 SAA1P0DJI8 122 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 MAXP61244 160 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 OCIAD2Q56VL3 154 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 LINC00299Q6ZSB3 139 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 MORN4Q8NDC4 146 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 CLEC2BQ92478 149 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 NABP2Q9BQ15 211 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 LIMD2Q9BT23 127 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 FKBP11Q9NYL4 201 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 NDUFAF1Q9Y375 327 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 SIP14410 1827 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 ZNF462Q96JM2 2506 aa0.54□□□□□ -2.32
HMGB1P30-201ENST00000492455 ZCCHC11Q5TAX3 1644 aaKnown RBP0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 PIK3C2AO00443 1686 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 PBRM1Q86U86 1689 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 LOC107984640A0A0U1RRK4 108 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 C3orf85A0A1B0GTC6 90 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 NBEAP1P0C6P0 100 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 PDE6GP18545 87 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 S100GP29377 79 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 CASC2Q6XLA1 102 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 CBLN4Q9NTU7 201 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 SPTBP11277 2137 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 ERBINQ96RT1 1412 aa0.53□□□□□ -2.32
HMGB1P30-201ENST00000492455 PHRF1Q9P1Y6 1649 aaKnown RBP0.53□□□□□ -2.33
HMGB1P30-201ENST00000492455 KNTC1P50748 2209 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 GNG14A0A1W2PPG7 69 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 A6NN06 94 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 M0QZK8 103 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 IGHV3-30P01768 117 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 IGHV3-30-5P0DP03 117 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 SLC25A4P12235 298 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 CRYGSP22914 178 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 SRP9P49458 86 aaKnown RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 RPS28P62857 69 aaKnown RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 NEDD8Q15843 81 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 IZUMO2Q6UXV1 221 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 C5orf17Q8NAS9 161 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 TMEM229BQ8NBD8 167 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 TMEM35BQ8NCS4 154 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 NAT14Q8WUY8 206 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 BOKQ9UMX3 212 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 MPC1Q9Y5U8 109 aa0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 TCOF1Q13428 1488 aaKnown RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 ZFC3H1O60293 1989 aaKnown RBP0.52□□□□□ -2.33
HMGB1P30-201ENST00000492455 LOC107984156A0A0G2JMH3 177 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 ZNF727A8MUV8 499 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 TSTD3H0UI37 97 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 A2MP01023 1474 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 RPL22P35268 128 aaKnown RBP0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 BLCAPP62952 87 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 FAM135BQ49AJ0 1406 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 ARL17AQ8IVW1 177 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 OR51A4Q8NGJ6 313 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 NUP210Q8TEM1 1887 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 SKA2Q8WVK7 121 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 DLC1Q96QB1 1528 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 TANC2Q9HCD6 1990 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 MRPL40Q9NQ50 206 aaKnown RBP0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 GINS2Q9Y248 185 aa0.51□□□□□ -2.33
HMGB1P30-201ENST00000492455 FANCMQ8IYD8 2048 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 TRBV30A0A0K0K1B3 111 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 LOC107986453A0A1B0GWG9 222 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 K7EIL1 84 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 HBDP02042 147 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 CCL4P13236 92 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 FXYD6P3P58550 94 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 DNAJB13P59910 316 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 CCSMST1Q4G0I0 132 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 TAC4Q86UU9 113 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 ATOH7Q8N100 152 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 C10orf111Q8N326 155 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 OR5A2Q8NGI9 324 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 BRK1Q8WUW1 75 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms