RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ACOT7LQ6ZUV0 252 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 PACRGLQ8N7B6 248 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 OR1S1Q8NH92 325 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 DTD1Q8TEA8 209 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 GLYATL2Q8WU03 294 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 SLC50A1Q9BRV3 221 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 TXNL4BQ9NX01 149 aaKnown RBP4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 A0A087WYN8 130 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 GGTLC3B5MD39 225 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 RGS10O43665 173 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 PFN1P07737 140 aaKnown RBP4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 S100A7P31151 101 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 CT83Q5H943 113 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 FAM122CQ6P4D5 195 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 REG3GQ6UW15 175 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 PRSS48Q7RTY5 328 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 SELENOHQ8IZQ5 122 aaKnown RBP4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 GPX8Q8TED1 209 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 RMI2Q96E14 147 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 GTSF1LQ9H1H1 148 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 RBKSQ9H477 322 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 SCN3BQ9NY72 215 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 VAX2Q9UIW0 290 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 HIGD1AQ9Y241 93 aa4.43□□□□□ -1.7
PDLIM1-203ENST00000490391 IGHV3-16A0A0C4DH30 117 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 CRYM-AS1A6NIL9 109 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 H3BTX0 84 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 ATP5HO75947 161 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 PRSS1P07477 247 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 CRISP2P16562 243 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 RNASE4P34096 147 aaKnown RBP4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 PLP1P60201 277 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 RAP2BP61225 183 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 OPCMLQ14982 345 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 PATE2Q6UY27 113 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 SLC25A29Q8N8R3 303 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 C8orf4Q9NR00 106 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 SSR3Q9UNL2 185 aa4.42□□□□□ -1.7
PDLIM1-203ENST00000490391 HYPMO75409 117 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SCGB1D2O95969 90 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 OR4E1P0C645 316 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SULT1A3P0DMM9 295 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SULT1A4P0DMN0 295 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SDC2P34741 201 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 PRSS3P35030 304 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 MXD1Q05195 221 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 ERCC8Q13216 396 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 TMEM268Q5VZI3 342 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 DPPA3Q6W0C5 159 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 ZFAND2AQ8N6M9 145 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 SAT2Q96F10 170 aaPredicted RBP4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 RNF185Q96GF1 192 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 ZC2HC1AQ96GY0 325 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 COPZ2Q9P299 210 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 CACFD1Q9UGQ2 172 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 TPRKBQ9Y3C4 175 aa4.41□□□□□ -1.7
PDLIM1-203ENST00000490391 TEX13DA0A0J9YY54 714 aaPredicted RBP4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 H3BQ15 152 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 LINC00869P0C866 280 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 IGLC2P0DOY2 106 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 VWC2Q2TAL6 325 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 CCDC71LQ8N9Z2 235 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 OR13C8Q8NGS7 320 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 AGPAT4-IT1Q9H0P7 198 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 PXMP4Q9Y6I8 212 aa4.4□□□□□ -1.71
PDLIM1-203ENST00000490391 FABP12A6NFH5 140 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 M0R3E3 92 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 PITX3O75364 302 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 IL5P05113 134 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 GPX1P07203 203 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 NMBP08949 121 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 OR5G3P0C626 314 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 RPL19P84098 196 aaKnown RBP4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 NIT1Q86X76 327 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 UBE2WQ96B02 151 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 S100A16Q96FQ6 103 aaKnown RBP4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 SPXQ9BT56 116 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 NAA60Q9H7X0 242 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 KLK12Q9UKR0 248 aa4.39□□□□□ -1.71
PDLIM1-203ENST00000490391 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms