RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	ZNF738	Q8NE65	137 aa		13.52	□□□□□ -0.25
SRM-206	ENST00000490101	TRBV6-1	A0A0K0K1D8	114 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	RBAKDN	A6NC62	111 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	FBLL1	A6NHQ2	334 aa	Known RBP	13.51	□□□□□ -0.25
SRM-206	ENST00000490101	PRAC2	D3DTV9	90 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	TMEM183B	Q1AE95	376 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	ZNF674	Q2M3X9	581 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	FAM24B	Q8N5W8	94 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	TMEM75	Q8N9X5	138 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	FMC1	Q96HJ9	113 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	LINC00479	Q96M42	142 aa		13.51	□□□□□ -0.25
SRM-206	ENST00000490101	TRAV34	A0A0B4J273	112 aa		13.5	□□□□□ -0.25
SRM-206	ENST00000490101		C9JCJ5	164 aa		13.5	□□□□□ -0.25
SRM-206	ENST00000490101	ZNF688	P0C7X2	276 aa		13.5	□□□□□ -0.25
SRM-206	ENST00000490101	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.5	□□□□□ -0.25
SRM-206	ENST00000490101	TRBV20OR9-2	A0A075B6H5	130 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.49	□□□□□ -0.25
SRM-206	ENST00000490101	IGKV2D-40	P01614	121 aa	Predicted RBP	13.49	□□□□□ -0.25
SRM-206	ENST00000490101	IGLV2-11	P01706	119 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	UBE2G1	P62253	170 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	GUCA2B	Q16661	112 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	TMEM241	Q24JQ0	296 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	NIPSNAP3B	Q9BS92	247 aa		13.49	□□□□□ -0.25
SRM-206	ENST00000490101	FLI1	Q01543	452 aa	Predicted RBP	13.48	□□□□□ -0.25
SRM-206	ENST00000490101	PSMG4	Q5JS54	123 aa		13.48	□□□□□ -0.25
SRM-206	ENST00000490101	SBSPON	Q8IVN8	264 aa		13.48	□□□□□ -0.25
SRM-206	ENST00000490101	IGF2BP2-AS1	Q96M15	143 aa		13.48	□□□□□ -0.25
SRM-206	ENST00000490101	NAT8	Q9UHE5	227 aa		13.48	□□□□□ -0.25
SRM-206	ENST00000490101	LY96	Q9Y6Y9	160 aa		13.48	□□□□□ -0.25
SRM-206	ENST00000490101	TRAV8-1	A0A0A6YYK1	113 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	GNG4	P50150	75 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	CMC4	P56277	68 aa	Predicted RBP	13.47	□□□□□ -0.25
SRM-206	ENST00000490101	CENPW	Q5EE01	88 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	C9orf47	Q6ZRZ4	202 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	OR8A1	Q8NGG7	326 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	OR10J6P	Q8NGY7	276 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	TVP23C	Q96ET8	276 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	VGLL1	Q99990	258 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	SDF2L1	Q9HCN8	221 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	PSG8	Q9UQ74	426 aa		13.47	□□□□□ -0.25
SRM-206	ENST00000490101	NPIPB6	E9PJ23	425 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	C3orf84	H3BNL1	204 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	LTA	P01374	205 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	APOC3	P02656	99 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	PRB4	P10163	310 aa	Predicted RBP	13.46	□□□□□ -0.25
SRM-206	ENST00000490101		Q86TA4	180 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	BAGE2	Q86Y30	109 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	SGK494	Q96LW2	274 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	RCHY1	Q96PM5	261 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	AGPAT4-IT1	Q9H0P7	198 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	MAP6D1	Q9H9H5	199 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	PPP1R14D	Q9NXH3	145 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	ZFP30	Q9Y2G7	519 aa		13.46	□□□□□ -0.25
SRM-206	ENST00000490101	FRMD6-AS1	P0C7T7	363 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	DEFB131A	P59861	70 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	PNRC1	Q12796	327 aa	Predicted RBP	13.45	□□□□□ -0.26
SRM-206	ENST00000490101	ERCC8	Q13216	396 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	PRNT	Q86SH4	94 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	SMIM12	Q96EX1	92 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	LINC00477	Q96M19	166 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101	FAM110A	Q9BQ89	295 aa		13.45	□□□□□ -0.26
SRM-206	ENST00000490101		A0A0J9YX75	114 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101		F6UB75	175 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	IGLV2-8	P01709	118 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	ZNF138	P52744	262 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	DEFB1	P60022	68 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	ODF3L2	Q3SX64	289 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	TMEM78	Q5T7P6	136 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	FOXI2	Q6ZQN5	318 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	OCC1	Q8TAD7	63 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	MLST8	Q9BVC4	326 aa		13.44	□□□□□ -0.26
SRM-206	ENST00000490101	RYR2	Q92736	4967 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	RPL23	P62829	140 aa	Known RBP	13.43	□□□□□ -0.26
SRM-206	ENST00000490101	HIST1H1A	Q02539	215 aa	Predicted RBP	13.43	□□□□□ -0.26
SRM-206	ENST00000490101	SAPCD1	Q5SSQ6	148 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	EBLN2	Q6P2I7	272 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	LINC01551	Q86U37	167 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	SVBP	Q8N300	66 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	MUC7	Q8TAX7	377 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	SAV1	Q9H4B6	383 aa	Predicted RBP	13.43	□□□□□ -0.26
SRM-206	ENST00000490101	ZNF492	Q9P255	531 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	LENEP	Q9Y5L5	61 aa		13.43	□□□□□ -0.26
SRM-206	ENST00000490101	PGPEP1L	A6NFU8	196 aa		13.42	□□□□□ -0.26
SRM-206	ENST00000490101	DUSP14	O95147	198 aa	Known RBP	13.42	□□□□□ -0.26
SRM-206	ENST00000490101	ZNF705D	P0CH99	300 aa	Predicted RBP	13.42	□□□□□ -0.26
SRM-206	ENST00000490101	ZNF705B	P0CI00	300 aa	Predicted RBP	13.42	□□□□□ -0.26
SRM-206	ENST00000490101	COX8C	Q7Z4L0	72 aa		13.42	□□□□□ -0.26
SRM-206	ENST00000490101	TMEM183A	Q8IXX5	376 aa		13.42	□□□□□ -0.26
SRM-206	ENST00000490101	TENM2	Q9NT68	2774 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	TRBV7-9	A0A0J9YWB2	115 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101		A8MTW9	85 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	OR11H12	B2RN74	326 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	ADIRF	Q15847	76 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	GDF5OS	Q5U4N7	250 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	CLRN3	Q8NCR9	226 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101		Q8TAT8	98 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	NDFIP1	Q9BT67	221 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101	ZMAT4	Q9H898	229 aa		13.41	□□□□□ -0.26
SRM-206	ENST00000490101		K7EN84	100 aa		13.4	□□□□□ -0.26
SRM-206	ENST00000490101	SNAPIN	O95295	136 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms