RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 POU2AF1Q16633 256 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 CENPWQ5EE01 88 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 GDF5OSQ5U4N7 250 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 ENY2Q9NPA8 101 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 DPM3Q9P2X0 92 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 SOX21Q9Y651 276 aaPredicted RBP14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.36□□□□□ -0.117e-8■■■□□ 16.4
POLR2J3-205ENST00000489144 CSPG4Q6UVK1 2322 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 RUSC1-AS1Q66K80 236 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 OR11H6Q8NGC7 330 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 PLEKHA3Q9HB20 300 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 PRNDQ9UKY0 176 aa14.36□□□□□ -0.11
POLR2J3-205ENST00000489144 CGB1A6NKQ9 187 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 FAM90A9PA6NNJ1 464 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 PLA2G2AP14555 144 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 ZFAND6Q6FIF0 208 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 C18orf15Q96N68 181 aa14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 SMAD7O15105 426 aaKnown RBP14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 AMMECR1Q9Y4X0 333 aaPredicted RBP14.35□□□□□ -0.11
POLR2J3-205ENST00000489144 FABP5P3A8MUU1 101 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 ODF3BA8MYP8 253 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 MFAP2P55001 183 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 FOXI1Q12951 378 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 IBA57Q5T440 356 aaKnown RBP14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 Q6AWC8 147 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 PQLC2Q6ZP29 291 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 HECTD1Q9ULT8 2610 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 NPIPB5A8MRT5 1133 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 TAS2R45P59539 299 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 PLGLAQ15195 96 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 TIGITQ495A1 244 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 GAGE13Q4V321 117 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 BRD3OSQ6XYD6 125 aa14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 SRSF8Q9BRL6 282 aaKnown RBP14.34□□□□□ -0.11
POLR2J3-205ENST00000489144 PRCDQ00LT1 54 aa14.33□□□□□ -0.11
POLR2J3-205ENST00000489144 PSG5Q15238 335 aa14.33□□□□□ -0.11
POLR2J3-205ENST00000489144 ITPR2Q14571 2701 aa14.33□□□□□ -0.11
POLR2J3-205ENST00000489144 A4D1N5 150 aa14.33□□□□□ -0.12
POLR2J3-205ENST00000489144 WT1-ASQ06250 92 aa14.33□□□□□ -0.12
POLR2J3-205ENST00000489144 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.12
POLR2J3-205ENST00000489144 TEX29Q8N6K0 151 aa14.33□□□□□ -0.12
POLR2J3-205ENST00000489144 H3BMG7 143 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 APOMO95445 188 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 PPDPFQ9H3Y8 114 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 TLN2Q9Y4G6 2542 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 IGHV3-21A0A0B4J1V1 117 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 E9PLD3 99 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 SAA4P35542 130 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 TMEM167AQ8TBQ9 72 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 CFHR4Q92496 578 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 PRO0461Q9UI25 63 aa14.32□□□□□ -0.12
POLR2J3-205ENST00000489144 FOXH1O75593 365 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 AREGP15514 252 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 NDUFA4L2Q9NRX3 87 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 CT45A10P0DMU9 189 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 SIGLEC9Q9Y336 463 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 TEX15Q9BXT5 2789 aa14.31□□□□□ -0.12
POLR2J3-205ENST00000489144 GCHFRP30047 84 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 ATP6V0E2Q8NHE4 81 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 PHLDA1Q8WV24 401 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 PTH2Q96A98 100 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 SPANXA1Q9NS26 97 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 TRAV25A0A0B4J276 109 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 PRSS29PA6NIE9 313 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 OR1L8Q8NGR8 309 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 SSMEM1Q8WWF3 244 aa14.3□□□□□ -0.12
POLR2J3-205ENST00000489144 TRAV40A0A0B4J280 105 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 A0A1B0GWB2 263 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 PRSS46E5RG02 174 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 CCDC179H3BU77 68 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 J3QKU1 62 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 ACTL6BO94805 426 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 CENPVL3A0A0U1RRI6 287 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 NCBP2LA6PVI3 153 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 NHLRC2Q8NBF2 726 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 VCX2Q9H322 139 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 C1orf159Q96HA4 380 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 AJUBAQ96IF1 538 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 WDR83OSQ9Y284 106 aa14.29□□□□□ -0.12
POLR2J3-205ENST00000489144 WIPF1O43516 503 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 OPRK1P41145 380 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 FHL3Q13643 280 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 TREML4Q6UXN2 200 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 PPP1R27Q86WC6 154 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 NUP35Q8NFH5 326 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 CREBBPQ92793 2442 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 TMEM116Q8NCL8 245 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 PRELID3AQ96N28 172 aa14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 CITED2Q99967 270 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-205ENST00000489144 RNF223E7ERA6 249 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 IGHG4P01861 327 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 CRYGBP07316 175 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 CSDC2Q9Y534 153 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 IGLV2-8P01709 118 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 FXYD2P54710 66 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms