RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RNASE6Q93091 150 aaKnown RBP11.17□□□□□ -0.62
RER1-207ENST00000488353 ZNF479Q96JC4 524 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 DCHS2Q6V1P9 2916 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 H3BMG7 143 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 DYNLRB1Q9NP97 96 aa11.17□□□□□ -0.62
RER1-207ENST00000488353 TRAV26-1A0A087WT03 109 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
RER1-207ENST00000488353 ODF1Q14990 250 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 WFDC3Q8IUB2 231 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.16□□□□□ -0.62
RER1-207ENST00000488353 NPYP01303 97 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 EVI2AP22794 236 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 GAGE13Q4V321 117 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 MTURNQ8N3F0 131 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 ASCL2Q99929 193 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 PIEZO1Q92508 2521 aa11.16□□□□□ -0.62
RER1-207ENST00000488353 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.15□□□□□ -0.62
RER1-207ENST00000488353 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
RER1-207ENST00000488353 IGKCP01834 107 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 DLX6P56179 175 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 LINC00311Q8N616 119 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 HLA-DRB4P13762 266 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 CRYBA4P53673 196 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 CDSNQ15517 529 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 HLA-DRB4X5D2U9 266 aa11.15□□□□□ -0.62
RER1-207ENST00000488353 CSMD1Q96PZ7 3565 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 PRSS1P07477 247 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 MC5RP33032 325 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 RPL27AP46776 148 aaKnown RBP11.14□□□□□ -0.63
RER1-207ENST00000488353 TAL2Q16559 108 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 CCL21O00585 134 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 KLF17Q5JT82 389 aaPredicted RBP11.14□□□□□ -0.63
RER1-207ENST00000488353 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
RER1-207ENST00000488353 TMSB15BA0A087X1C1 80 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 C17orf77Q96MU5 243 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 TMEM133Q9H2Q1 129 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
RER1-207ENST00000488353 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
RER1-207ENST00000488353 FCER1GP30273 86 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 LEPP41159 167 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 ARHGAP32A7KAX9 2087 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 AGRNO00468 2067 aa11.13□□□□□ -0.63
RER1-207ENST00000488353 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 DPM2O94777 84 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 CD3EP07766 207 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 TWIST1Q15672 202 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 GTSCR1Q86UQ5 136 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 ZNF48Q96MX3 618 aaPredicted RBP11.12□□□□□ -0.63
RER1-207ENST00000488353 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
RER1-207ENST00000488353 ATP5LO75964 103 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 COX7A1P24310 79 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 UCNP55089 124 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 FBXL15Q9H469 300 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
RER1-207ENST00000488353 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 SH2D1AO60880 128 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 INSL3P51460 131 aa11.11□□□□□ -0.63
RER1-207ENST00000488353 SPTBN1Q01082 2364 aaKnown RBP11.1□□□□□ -0.63
RER1-207ENST00000488353 K7EMI3 77 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 RBP4P02753 201 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 KLRB1Q12918 225 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 M0R3E3 92 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 PLGLAQ15195 96 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 IGFBPL1Q8WX77 278 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 FOXC2Q99958 501 aa11.1□□□□□ -0.63
RER1-207ENST00000488353 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 H3BRN7 92 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 APOMO95445 188 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 PPP1R27Q86WC6 154 aa11.09□□□□□ -0.63
RER1-207ENST00000488353 ZNF418Q8TF45 676 aaPredicted RBP11.09□□□□□ -0.63
RER1-207ENST00000488353 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms