RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-219ENST00000488186 INSP01308 110 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 HBE1P02100 147 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 CT45A10P0DMU9 189 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 PPT1P50897 306 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 ALKAL2Q6UX46 152 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 C5orf17Q8NAS9 161 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 IGF2BP2-AS1Q96M15 143 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
C9orf3-219ENST00000488186 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 RBAKDNA6NC62 111 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
C9orf3-219ENST00000488186 J3KRW8 73 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 GOLT1AQ6ZVE7 132 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 WWC2-AS2Q96NR7 200 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 VGLL1Q99990 258 aa11.46□□□□□ -0.57
C9orf3-219ENST00000488186 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
C9orf3-219ENST00000488186 ZNF138P52744 262 aa11.45□□□□□ -0.58
C9orf3-219ENST00000488186 GNG5P63218 68 aa11.45□□□□□ -0.58
C9orf3-219ENST00000488186 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
C9orf3-219ENST00000488186 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
C9orf3-219ENST00000488186 FAM74A7A6NL05 159 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 F6UZH7 168 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 GPX1P07203 203 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 LINC01587Q99440 93 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 ZNF492Q9P255 531 aa11.44□□□□□ -0.58
C9orf3-219ENST00000488186 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
C9orf3-219ENST00000488186 GGTLC3B5MD39 225 aa11.43□□□□□ -0.58
C9orf3-219ENST00000488186 PAGE4O60829 102 aa11.43□□□□□ -0.58
C9orf3-219ENST00000488186 TCRAP04437 139 aa11.43□□□□□ -0.58
C9orf3-219ENST00000488186 MIFP14174 115 aa11.43□□□□□ -0.58
C9orf3-219ENST00000488186 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 A0A0J9YWU9 116 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-219ENST00000488186 IFNA1P01562 189 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 HTN1P15515 57 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
C9orf3-219ENST00000488186 TMEM256Q8N2U0 113 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 CYB561D1Q8N8Q1 229 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 Q8TAT8 98 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 MANBALQ9NQG1 85 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 ARL2-SNX15V9GYD0 113 aa11.42□□□□□ -0.58
C9orf3-219ENST00000488186 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 NMBP08949 121 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 RRN3P1Q2M238 152 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 GFI1BQ5VTD9 330 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-219ENST00000488186 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 HIST1H2BAQ96A08 127 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 X6R8D5 127 aa11.41□□□□□ -0.58
C9orf3-219ENST00000488186 IGHV4-28A0A0C4DH34 117 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 C7orf71A4D174 169 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 FBLL1A6NHQ2 334 aaKnown RBP11.4□□□□□ -0.58
C9orf3-219ENST00000488186 H7BYZ3 331 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 PEX7O00628 323 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 DEFB4AO15263 64 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 CCL20P78556 96 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 NEU1Q99519 415 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 TCEAL7Q9BRU2 100 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.58
C9orf3-219ENST00000488186 TRAV8-1A0A0A6YYK1 113 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 CRISP2P16562 243 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 ATP5G3P48201 142 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-219ENST00000488186 KIR3DS1Q14943 382 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 FAM19A4Q96LR4 140 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 TREM1Q9NP99 234 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 PSG8Q9UQ74 426 aa11.39□□□□□ -0.59
C9orf3-219ENST00000488186 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 ZNF705GA8MUZ8 300 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-219ENST00000488186 EMP1P54849 157 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 TAS2R60P59551 318 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 UBE2G1P62253 170 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 BTN1A1Q13410 526 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 TMEM75Q8N9X5 138 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
C9orf3-219ENST00000488186 TRAV34A0A0B4J273 112 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 KLLNB2CW77 178 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 AKR1C3P42330 323 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
C9orf3-219ENST00000488186 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms