RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 HSPB7Q9UBY9 170 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 TPRKBQ9Y3C4 175 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 TRAV8-1A0A0A6YYK1 113 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 PRSS46E5RG02 174 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 MPDU1O75352 247 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 B3GALNT1O75752 331 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 SNRPCP09234 159 aaKnown RBP5.19□□□□□ -1.58
XRN1-212ENST00000486211 PRSS3P35030 304 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 LCN15Q6UWW0 184 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 ACOT7LQ6ZUV0 252 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 RASL10AQ92737 203 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 SLC50A1Q9BRV3 221 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 HIGD1AQ9Y241 93 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 KIF25-AS1Q9Y6Z4 181 aa5.19□□□□□ -1.58
XRN1-212ENST00000486211 TRAV4A0A0B4J268 109 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 CRYM-AS1A6NIL9 109 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 PHOX2AO14813 284 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 PFN1P07737 140 aaKnown RBP5.18□□□□□ -1.58
XRN1-212ENST00000486211 SULT1A3P0DMM9 295 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 SULT1A4P0DMN0 295 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 GATA1P15976 413 aaPredicted RBP5.18□□□□□ -1.58
XRN1-212ENST00000486211 PLP1P60201 277 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 RAP2BP61225 183 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 MXD1Q05195 221 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 PRR9Q5T870 116 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 SDIM1Q6ZPB5 146 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 RMI2Q96E14 147 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 COPZ2Q9P299 210 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 CACFD1Q9UGQ2 172 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 SSR3Q9UNL2 185 aa5.18□□□□□ -1.58
XRN1-212ENST00000486211 IGKV2D-24A0A075B6R9 120 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 IGHV1OR15-1A0A075B7D0 117 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 GGTLC3B5MD39 225 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 H3BTX0 84 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 HYPMO75409 117 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 RNASE4P34096 147 aaKnown RBP5.17□□□□□ -1.58
XRN1-212ENST00000486211 ERCC8Q13216 396 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 OPCMLQ14982 345 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 TMEM268Q5VZI3 342 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 PATE2Q6UY27 113 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 CCDC71LQ8N9Z2 235 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 OR13C8Q8NGS7 320 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 SAT2Q96F10 170 aaPredicted RBP5.17□□□□□ -1.58
XRN1-212ENST00000486211 S100A16Q96FQ6 103 aaKnown RBP5.17□□□□□ -1.58
XRN1-212ENST00000486211 MLST8Q9BVC4 326 aa5.17□□□□□ -1.58
XRN1-212ENST00000486211 IGHV3-16A0A0C4DH30 117 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 TEX13DA0A0J9YY54 714 aaPredicted RBP5.16□□□□□ -1.58
XRN1-212ENST00000486211 OR4E1P0C645 316 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 CRISP2P16562 243 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
XRN1-212ENST00000486211 C14orf177Q52M58 125 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 FAM122CQ6P4D5 195 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 ATRAIDQ6UW56 229 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 CYP2G1PQ6ZSU1 146 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 ZFAND2AQ8N6M9 145 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 GTSF1LQ9H1H1 148 aa5.16□□□□□ -1.58
XRN1-212ENST00000486211 A0A087WYN8 130 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 H3BQ15 152 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 OR5G3P0C626 314 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 LINC00869P0C866 280 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 IGLC2P0DOY2 106 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 UBE2NLQ5JXB2 153 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 REG3GQ6UW15 175 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 DPPA3Q6W0C5 159 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 SLC25A29Q8N8R3 303 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 OR4C5Q8NGB2 326 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 ZFAND1Q8TCF1 268 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 AGPAT4-IT1Q9H0P7 198 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 NAA60Q9H7X0 242 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 PXMP4Q9Y6I8 212 aa5.15□□□□□ -1.59
XRN1-212ENST00000486211 IL5P05113 134 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 GPX1P07203 203 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 PRSS1P07477 247 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 NMBP08949 121 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 ANXA7P20073 488 aaKnown RBP5.14□□□□□ -1.59
XRN1-212ENST00000486211 CCR6P51684 374 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 RAB11AP62491 216 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 AKR1C1Q04828 323 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 SMCO1Q147U7 214 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 VWC2Q2TAL6 325 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 DGAT2L7PQ6IED9 249 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 SPINK6Q6UWN8 80 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 MARCH1Q8TCQ1 289 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 ZC2HC1AQ96GY0 325 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 RTBDNQ9BSG5 229 aaPredicted RBP5.14□□□□□ -1.59
XRN1-212ENST00000486211 SPXQ9BT56 116 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 ARV1Q9H2C2 271 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 VAX2Q9UIW0 290 aa5.14□□□□□ -1.59
XRN1-212ENST00000486211 FABP12A6NFH5 140 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 USP17L23D6RBM5 183 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 M0R3E3 92 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 IAPPP10997 89 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 SAMD12Q8N8I0 201 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 OR4D10Q8NGI6 311 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 TERB2Q8NHR7 220 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 RNF185Q96GF1 192 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 LINC00477Q96M19 166 aa5.13□□□□□ -1.59
XRN1-212ENST00000486211 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms