RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 Q9H3A6 140 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 NOP10Q9NPE3 64 aaKnown RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 FXYD6-FXYD2A0A087WZ82 144 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 C7orf71A4D174 169 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 RNASE4P34096 147 aaKnown RBP8.68□□□□□ -1.02
MSH5-216ENST00000484309 TAS2R45P59539 299 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 ACOT6Q3I5F7 207 aaPredicted RBP8.68□□□□□ -1.02
MSH5-216ENST00000484309 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 PRR9Q5T870 116 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 AQP10Q96PS8 301 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 RPH3ALQ9UNE2 315 aa8.68□□□□□ -1.02
MSH5-216ENST00000484309 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
MSH5-216ENST00000484309 DNAH10Q8IVF4 4471 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 A0A1W2PPV4 95 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 F5H768 121 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 SLC25A5P05141 298 aaKnown RBP8.67□□□□□ -1.02
MSH5-216ENST00000484309 M6PRP20645 277 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 Q6ZQT7 251 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 ZNF493Q6ZR52 646 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 CCDC28AQ8IWP9 274 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 OR10G4Q8NGN3 311 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 OR10G9Q8NGN4 311 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 OR10G7Q8NGN6 311 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 HYLS1Q96M11 299 aa8.67□□□□□ -1.02
MSH5-216ENST00000484309 KLLNB2CW77 178 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 GPX1P07203 203 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 P0DMU3 169 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 ATP6V0CP27449 155 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 CSN1S1P47710 185 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 ZNF266Q14584 549 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 ZFAND2AQ8N6M9 145 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 OR2T35Q8NGX2 323 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 SH3BGRL3Q9H299 93 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 ZNF492Q9P255 531 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 FRAS1Q86XX4 4008 aa8.66□□□□□ -1.02
MSH5-216ENST00000484309 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 RNF222A6NCQ9 220 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 SNURFLB1AK76 121 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 GAGE7O76087 117 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 ATP5G1P05496 136 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 CRISP2P16562 243 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 ATP5G3P48201 142 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.02
MSH5-216ENST00000484309 ZNF138P52744 262 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 INO80EQ8NBZ0 244 aaPredicted RBP8.65□□□□□ -1.02
MSH5-216ENST00000484309 FAM210BQ96KR6 192 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
MSH5-216ENST00000484309 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.03
MSH5-216ENST00000484309 PGPA6NDG6 321 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 CBY3A6NI87 242 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 SMLR1H3BR10 107 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 ZNF324O75467 553 aaPredicted RBP8.64□□□□□ -1.03
MSH5-216ENST00000484309 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
MSH5-216ENST00000484309 PQLC2Q6ZP29 291 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 LYPD1Q8N2G4 141 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 OR2G3Q8NGZ4 309 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 ASB13Q8WXK3 278 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 PSMG3Q9BT73 122 aaPredicted RBP8.64□□□□□ -1.03
MSH5-216ENST00000484309 GSN-AS1Q9NRJ2 163 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 TNFSF18Q9UNG2 199 aa8.64□□□□□ -1.03
MSH5-216ENST00000484309 IGLV2-18A0A075B6J9 118 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 G3V3Q6 166 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 M0R2N4 97 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 RGS13O14921 159 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 NUDT3O95989 172 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 GNG5P63218 68 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 Q6ZTI0 123 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 EIF4E3Q8N5X7 224 aaKnown RBP8.63□□□□□ -1.03
MSH5-216ENST00000484309 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 OTORQ9NRC9 128 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 MUC4Q99102 2169 aa8.63□□□□□ -1.03
MSH5-216ENST00000484309 RBAKDNA6NC62 111 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 ARPC5O15511 151 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 STAG3L3P0CL85 134 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 OR5I1Q13606 314 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 MUC21Q5SSG8 566 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 SSX7Q7RTT5 188 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 LINC00612Q8N6U2 182 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 RXFP4Q8TDU9 374 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 RAB24Q969Q5 203 aa8.62□□□□□ -1.03
MSH5-216ENST00000484309 TMPRSS5Q9H3S3 457 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms