RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 LINC01587Q99440 93 aa15.07■□□□□ 0
SEC13-217ENST00000482647 DIRC3C9JPN6 131 aa15.06■□□□□ 0
SEC13-217ENST00000482647 PMS2P11Q13670 270 aa15.06■□□□□ 0
SEC13-217ENST00000482647 ZNF726P1Q15940 193 aa15.06■□□□□ 0
SEC13-217ENST00000482647 SSX7Q7RTT5 188 aa15.06■□□□□ 0
SEC13-217ENST00000482647 VGLL1Q99990 258 aa15.06■□□□□ 0
SEC13-217ENST00000482647 C20orf144Q9BQM9 153 aa15.06■□□□□ 0
SEC13-217ENST00000482647 CSMD3Q7Z407 3707 aa15.06■□□□□ 0
SEC13-217ENST00000482647 RBAKDNA6NC62 111 aa15.05■□□□□ -0
SEC13-217ENST00000482647 UMAD1C9J7I0 102 aa15.05■□□□□ -0
SEC13-217ENST00000482647 SLC25A5P05141 298 aaKnown RBP15.05■□□□□ -0
SEC13-217ENST00000482647 TPT1P13693 172 aaKnown RBP15.05■□□□□ -0
SEC13-217ENST00000482647 NANOS2P60321 138 aaKnown RBP15.05■□□□□ -0
SEC13-217ENST00000482647 LGALSLQ3ZCW2 172 aaPredicted RBP15.05■□□□□ -0
SEC13-217ENST00000482647 IQCF2Q8IXL9 164 aa15.05■□□□□ -0
SEC13-217ENST00000482647 ARL6IP6Q8N6S5 226 aa15.05■□□□□ -0
SEC13-217ENST00000482647 KMT2CQ8NEZ4 4911 aaKnown RBP15.05■□□□□ -0
SEC13-217ENST00000482647 LOC102723971A0A1B0GUV8 181 aa15.04■□□□□ -0
SEC13-217ENST00000482647 NMBP08949 121 aa15.04■□□□□ -0
SEC13-217ENST00000482647 ZNF138P52744 262 aa15.04■□□□□ -0
SEC13-217ENST00000482647 EMP1P54849 157 aa15.04■□□□□ -0
SEC13-217ENST00000482647 KIR3DS1Q14943 382 aa15.04■□□□□ -0
SEC13-217ENST00000482647 GFI1BQ5VTD9 330 aa15.04■□□□□ -0
SEC13-217ENST00000482647 FAM19A4Q96LR4 140 aa15.04■□□□□ -0
SEC13-217ENST00000482647 ZNF492Q9P255 531 aa15.04■□□□□ -0
SEC13-217ENST00000482647 H7BYZ3 331 aa15.03■□□□□ -0
SEC13-217ENST00000482647 J3KRW8 73 aa15.03■□□□□ -0
SEC13-217ENST00000482647 TAS2R60P59551 318 aa15.03■□□□□ -0
SEC13-217ENST00000482647 STOML3Q8TAV4 291 aa15.03■□□□□ -0
SEC13-217ENST00000482647 TRBV7-9A0A0J9YWB2 115 aa15.02■□□□□ -0
SEC13-217ENST00000482647 A0A1B0GVG6 124 aa15.02■□□□□ -0
SEC13-217ENST00000482647 MAP1LC3B2A6NCE7 125 aa15.02■□□□□ -0
SEC13-217ENST00000482647 NUPR2A6NF83 97 aa15.02■□□□□ -0
SEC13-217ENST00000482647 ZNF705GA8MUZ8 300 aaPredicted RBP15.02■□□□□ -0
SEC13-217ENST00000482647 CRISP2P16562 243 aa15.02■□□□□ -0
SEC13-217ENST00000482647 NIPSNAP3BQ9BS92 247 aa15.02■□□□□ -0
SEC13-217ENST00000482647 MAP1LC3BQ9GZQ8 125 aa15.02■□□□□ -0
SEC13-217ENST00000482647 TRAV12-3A0A0B4J271 114 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 KLLNB2CW77 178 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 GPX1P07203 203 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 SPART-AS1P0CW21 52 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 HTN1P15515 57 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 FGF8P55075 233 aaPredicted RBP15.01□□□□□ -0.01
SEC13-217ENST00000482647 EIF5AL1Q6IS14 154 aaKnown RBP15.01□□□□□ -0.01
SEC13-217ENST00000482647 CEMP1Q6PRD7 247 aaPredicted RBP15.01□□□□□ -0.01
SEC13-217ENST00000482647 PHLDA1Q8WV24 401 aaPredicted RBP15.01□□□□□ -0.01
SEC13-217ENST00000482647 TMED6Q8WW62 240 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 RPH3ALQ9UNE2 315 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 TENM2Q9NT68 2774 aa15.01□□□□□ -0.01
SEC13-217ENST00000482647 A0A1W2PRE2 83 aa15□□□□□ -0.01
SEC13-217ENST00000482647 C7orf71A4D174 169 aa15□□□□□ -0.01
SEC13-217ENST00000482647 PRM2P04554 102 aa15□□□□□ -0.01
SEC13-217ENST00000482647 RNASE4P34096 147 aaKnown RBP15□□□□□ -0.01
SEC13-217ENST00000482647 FHITP49789 147 aa15□□□□□ -0.01
SEC13-217ENST00000482647 ZFP69Q49AA0 526 aa15□□□□□ -0.01
SEC13-217ENST00000482647 DPPA3Q6W0C5 159 aa15□□□□□ -0.01
SEC13-217ENST00000482647 GOLT1AQ6ZVE7 132 aa15□□□□□ -0.01
SEC13-217ENST00000482647 C5orf17Q8NAS9 161 aa15□□□□□ -0.01
SEC13-217ENST00000482647 TMPRSS5Q9H3S3 457 aa15□□□□□ -0.01
SEC13-217ENST00000482647 PLA2G2EQ9NZK7 142 aa15□□□□□ -0.01
SEC13-217ENST00000482647 CELA1Q9UNI1 258 aa15□□□□□ -0.01
SEC13-217ENST00000482647 TEX48A0A1B0GUV7 120 aa14.99□□□□□ -0.01
SEC13-217ENST00000482647 SUMO1P63165 101 aaKnown RBP14.99□□□□□ -0.01
SEC13-217ENST00000482647 CD300CQ08708 224 aa14.99□□□□□ -0.01
SEC13-217ENST00000482647 Q8TAT8 98 aa14.99□□□□□ -0.01
SEC13-217ENST00000482647 FAM213BQ8TBF2 198 aa14.99□□□□□ -0.01
SEC13-217ENST00000482647 KLK5Q9Y337 293 aaPredicted RBP14.99□□□□□ -0.01
SEC13-217ENST00000482647 YTHDF2Q9Y5A9 579 aaKnown RBP14.99□□□□□ -0.01
SEC13-217ENST00000482647 SERTM2A0A1B0GWG4 89 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 AZU1P20160 251 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 GNG5P63218 68 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 SLC51BQ86UW2 128 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 CCDC28AQ8IWP9 274 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 ZFAND2AQ8N6M9 145 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 DKK2Q9UBU2 259 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 LENEPQ9Y5L5 61 aa14.98□□□□□ -0.01
SEC13-217ENST00000482647 GGTLC3B5MD39 225 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 C11orf94C9JXX5 98 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 K7EQM0 130 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 TCRAP04437 139 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 BTN1A1Q13410 526 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 C12orf74Q32Q52 190 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 FAM222AQ5U5X8 452 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 ZNF493Q6ZR52 646 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 SFT2D1Q8WV19 159 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 MBD3L1Q8WWY6 194 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 C16orf74Q96GX8 76 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 NKX6-2Q9C056 277 aaPredicted RBP14.97□□□□□ -0.01
SEC13-217ENST00000482647 EPDR1Q9UM22 224 aa14.97□□□□□ -0.01
SEC13-217ENST00000482647 ZNF324O75467 553 aaPredicted RBP14.96□□□□□ -0.01
SEC13-217ENST00000482647 UBE2G2P60604 165 aa14.96□□□□□ -0.01
SEC13-217ENST00000482647 Q6ZTC4 211 aa14.96□□□□□ -0.01
SEC13-217ENST00000482647 C9orf62Q8N4C0 152 aa14.96□□□□□ -0.01
SEC13-217ENST00000482647 PLECQ15149 4684 aaKnown RBP14.95□□□□□ -0.02
SEC13-217ENST00000482647 RAB5CP51148 216 aa14.95□□□□□ -0.02
SEC13-217ENST00000482647 ZNF767PQ75MW2 155 aa14.95□□□□□ -0.02
SEC13-217ENST00000482647 TMEM263Q8WUH6 116 aaKnown RBP14.95□□□□□ -0.02
SEC13-217ENST00000482647 FAM74A7A6NL05 159 aa14.94□□□□□ -0.02
SEC13-217ENST00000482647 IFNA7P01567 189 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms