RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SCGB2A1O75556 95 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 BMI1P35226 326 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 MYOZ3Q8TDC0 251 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 TMEM158Q8WZ71 300 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 LINC00527Q9UJ94 153 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 TGFAP01135 160 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 IGLV2-11P01706 119 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 DPM3Q9P2X0 92 aa10.01□□□□□ -0.81
VPS52-218ENST00000482399 M0R381 172 aa10□□□□□ -0.81
VPS52-218ENST00000482399 NDUFS7O75251 213 aa10□□□□□ -0.81
VPS52-218ENST00000482399 CSTL1Q9H114 145 aa10□□□□□ -0.81
VPS52-218ENST00000482399 RAI1Q7Z5J4 1906 aaPredicted RBP10□□□□□ -0.81
VPS52-218ENST00000482399 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
VPS52-218ENST00000482399 K7EIM0 57 aa10□□□□□ -0.81
VPS52-218ENST00000482399 MGPP08493 103 aa10□□□□□ -0.81
VPS52-218ENST00000482399 RBPJQ06330 500 aa10□□□□□ -0.81
VPS52-218ENST00000482399 AKAP13Q12802 2813 aa10□□□□□ -0.81
VPS52-218ENST00000482399 I3L2K1 104 aa10□□□□□ -0.81
VPS52-218ENST00000482399 CRYGCP07315 174 aa10□□□□□ -0.81
VPS52-218ENST00000482399 Q6AWC8 147 aa10□□□□□ -0.81
VPS52-218ENST00000482399 SCGB1D4Q6XE38 83 aa10□□□□□ -0.81
VPS52-218ENST00000482399 FXYD2P54710 66 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 TIMD4Q96H15 378 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 ASH1LQ9NR48 2969 aaKnown RBP9.99□□□□□ -0.81
VPS52-218ENST00000482399 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 THBDP07204 575 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 CEACAM3P40198 252 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 PAX2Q02962 417 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 PVRIGQ6DKI7 326 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 ARPC1AQ92747 370 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 RELNP78509 3460 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
VPS52-218ENST00000482399 NUP37Q8NFH4 326 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 PRR25Q96S07 402 aa9.99□□□□□ -0.81
VPS52-218ENST00000482399 H3BRM9 83 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 H3BRN7 92 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 ZNF80P51504 273 aaPredicted RBP9.98□□□□□ -0.81
VPS52-218ENST00000482399 NDPQ00604 133 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 Q6ZS92 163 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 OR4X2Q8NGF9 303 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 TMEM8BA6NDV4 472 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 K7EP34 96 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 IGKCP01834 107 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 APOBEC3AP31941 199 aaPredicted RBP9.98□□□□□ -0.81
VPS52-218ENST00000482399 EFNA4P52798 201 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 OR9G4Q8NGQ1 327 aa9.98□□□□□ -0.81
VPS52-218ENST00000482399 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 A0A1B0GW15 77 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 A0A1W2PPM0 123 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 FABP5P3A8MUU1 101 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 TNFRSF6BO95407 300 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 GLMPQ8WWB7 406 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 LINC00574Q9H8X3 128 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 AGRNO00468 2067 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 EMP1P54849 157 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS52-218ENST00000482399 ETDBQ3ZM63 59 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 SPENQ96T58 3664 aaKnown RBP9.97□□□□□ -0.81
VPS52-218ENST00000482399 TMEM238C9JI98 176 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 LGALS9BQ3B8N2 356 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 LGALS9CQ6DKI2 356 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 IL17RELQ6ZVW7 336 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 RAB1BQ9H0U4 201 aa9.97□□□□□ -0.81
VPS52-218ENST00000482399 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.81
VPS52-218ENST00000482399 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.81
VPS52-218ENST00000482399 ZNF672Q499Z4 452 aaPredicted RBP9.96□□□□□ -0.81
VPS52-218ENST00000482399 IGFL2Q6UWQ7 119 aa9.96□□□□□ -0.81
VPS52-218ENST00000482399 TMEM14CQ9P0S9 112 aa9.96□□□□□ -0.81
VPS52-218ENST00000482399 CACNA1AO00555 2505 aa9.96□□□□□ -0.81
VPS52-218ENST00000482399 PRAC2D3DTV9 90 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 H3BMG7 143 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 H3BVH4 76 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 PPBPP02775 128 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 SH2D6Q7Z4S9 175 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
VPS52-218ENST00000482399 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.82
VPS52-218ENST00000482399 J3QR89 54 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 DPM2O94777 84 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 C15orf32Q32M92 178 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 INS-IGF2F8WCM5 200 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms