RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SCRT1Q9BWW7 348 aa4.48□□□□□ -1.69
CBX3-206ENST00000481057 EHFQ9NZC4 300 aa4.48□□□□□ -1.69
CBX3-206ENST00000481057 AK3Q9UIJ7 227 aa4.48□□□□□ -1.69
CBX3-206ENST00000481057 NOP16Q9Y3C1 178 aaKnown RBP4.48□□□□□ -1.69
CBX3-206ENST00000481057 DNAJC15Q9Y5T4 150 aa4.48□□□□□ -1.69
CBX3-206ENST00000481057 V9GYY9 64 aa4.48□□□□□ -1.69
CBX3-206ENST00000481057 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 A0A0A6YYD4 124 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 H3BRM9 83 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 TIMM8AO60220 97 aaPredicted RBP4.47□□□□□ -1.69
CBX3-206ENST00000481057 HSBP1O75506 76 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 MOSP00540 346 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 CD55P08174 381 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 CAV3P56539 151 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
CBX3-206ENST00000481057 TNFAIP6P98066 277 aaPredicted RBP4.47□□□□□ -1.69
CBX3-206ENST00000481057 DEFB136Q30KP8 78 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 ZNF678Q5SXM1 525 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 GLIPR1L1Q6UWM5 242 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 AAED1Q7RTV5 226 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.47□□□□□ -1.69
CBX3-206ENST00000481057 LINC00471Q8N535 108 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 C8orf31Q8N9H6 132 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 OR2K2Q8NGT1 345 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 ZNRF2Q8NHG8 242 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 MBD3L1Q8WWY6 194 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 S100A16Q96FQ6 103 aaKnown RBP4.47□□□□□ -1.69
CBX3-206ENST00000481057 GGTLC1Q9BX51 225 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 TMEM133Q9H2Q1 129 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 PPDPFQ9H3Y8 114 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 POPDC3Q9HBV1 291 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 HES4Q9HCC6 221 aa4.47□□□□□ -1.69
CBX3-206ENST00000481057 TRAV9-1A0A075B6T8 112 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 A0A0U1RQV1 116 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 RBFOX3A6NFN3 312 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 OR2T8A6NH00 312 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 TMEM212A6NML5 194 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 F5H5K5 113 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 PLPP1O14494 284 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 DHRS3O75911 302 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 HRASP01112 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 CT45A6P0DMU7 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 CT45A5P0DMU8 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 CT45A7P0DMV0 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 SRIP30626 198 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 GZMMP51124 257 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 ATP1B3P54709 279 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 MFAP2P55001 183 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 SMIM11AP58511 58 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 YPEL3P61236 119 aaPredicted RBP4.46□□□□□ -1.7
CBX3-206ENST00000481057 OR7A5Q15622 319 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 MSMO1Q15800 293 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 CT45A1Q5HYN5 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 BVES-AS1Q5T3Y7 98 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 FAM219BQ5XKK7 198 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 SPATA12Q7Z6I5 190 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 PPP1R27Q86WC6 154 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 SAXO1Q8IYX7 474 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 ZIC4Q8N9L1 334 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 ATP6V0E2Q8NHE4 81 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 CT45A3Q8NHU0 189 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 AQP3Q92482 292 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 FLYWCH2Q96CP2 140 aaKnown RBP4.46□□□□□ -1.7
CBX3-206ENST00000481057 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 NPVFQ9HCQ7 196 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 MTFP1Q9UDX5 166 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 ANXA10Q9UJ72 324 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 IER3IP1Q9Y5U9 82 aa4.46□□□□□ -1.7
CBX3-206ENST00000481057 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 KBTBD11-OT1A0A1B0GTJ5 212 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 DUXBA0A1W2PPF3 345 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 C7orf71A4D174 169 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 PRSS37A4D1T9 235 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 F8W1H4 67 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 RER1O15258 196 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 NUDT14O95848 222 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 SRP19P09132 144 aaKnown RBP4.45□□□□□ -1.7
CBX3-206ENST00000481057 LINC00869P0C866 280 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 HRH1P35367 487 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 SLC25A1P53007 311 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 ATXN7L3Q14CW9 347 aaPredicted RBP4.45□□□□□ -1.7
CBX3-206ENST00000481057 MRPL23Q16540 153 aaKnown RBP4.45□□□□□ -1.7
CBX3-206ENST00000481057 MPV17LQ2QL34 196 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 STUMQ69YW2 141 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 Q6Q795 121 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 ACP7Q6ZNF0 438 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 OR4K13Q8NH42 304 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 DERL3Q96Q80 235 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 SDF2Q99470 211 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 EBPLQ9BY08 206 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 OR2D2Q9H210 308 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 RPRMQ9NS64 109 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 RABAC1Q9UI14 185 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 APLNQ9ULZ1 77 aa4.45□□□□□ -1.7
CBX3-206ENST00000481057 ZNF443Q9Y2A4 671 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms