RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
SMG5-204ENST00000476954 MUC2Q02817 5179 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 PANO1I0J062 215 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 GPX1P07203 203 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 IGLC2P0DOY2 106 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 SH2D6Q7Z4S9 175 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 ZFAND2AQ8N6M9 145 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 TMEM229BQ8NBD8 167 aa9.86□□□□□ -0.83
SMG5-204ENST00000476954 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
SMG5-204ENST00000476954 BPIFA4PQ86YQ2 179 aa9.85□□□□□ -0.83
SMG5-204ENST00000476954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.85□□□□□ -0.83
SMG5-204ENST00000476954 TAS2R19P59542 299 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 SURF2Q15527 256 aaPredicted RBP9.84□□□□□ -0.83
SMG5-204ENST00000476954 NEDD8Q15843 81 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 RASL10AQ92737 203 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 KCNIP3Q9Y2W7 256 aa9.84□□□□□ -0.83
SMG5-204ENST00000476954 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 CRISP2P16562 243 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 SELENOTP62341 195 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 SLC38A11Q08AI6 406 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 IZUMO2Q6UXV1 221 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 OR4C5Q8NGB2 326 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 DPH3P1Q9H4G8 78 aa9.83□□□□□ -0.84
SMG5-204ENST00000476954 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
SMG5-204ENST00000476954 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
SMG5-204ENST00000476954 IGKV2D-24A0A075B6R9 120 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 FAM25AB3EWG3 89 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 FAM25CB3EWG5 89 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 FAM25GB3EWG6 89 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 SYNGR2O43760 224 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 PFN1P07737 140 aaKnown RBP9.81□□□□□ -0.84
SMG5-204ENST00000476954 RPP30P78346 268 aaKnown RBP9.81□□□□□ -0.84
SMG5-204ENST00000476954 S100A7AQ86SG5 101 aa9.81□□□□□ -0.84
SMG5-204ENST00000476954 IGKV2-40A0A087WW87 121 aaPredicted RBP9.8□□□□□ -0.84
SMG5-204ENST00000476954 MED6O75586 246 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 IGKV2D-40P01614 121 aaPredicted RBP9.8□□□□□ -0.84
SMG5-204ENST00000476954 TMEM183BQ1AE95 376 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 TMEM183AQ8IXX5 376 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 SLC25A29Q8N8R3 303 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 OR51S1Q8NGJ8 323 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 CIB3Q96Q77 187 aaPredicted RBP9.8□□□□□ -0.84
SMG5-204ENST00000476954 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
SMG5-204ENST00000476954 STRAPQ9Y3F4 350 aaKnown RBP9.8□□□□□ -0.84
SMG5-204ENST00000476954 DISC1C4P0D8 188 aa9.79□□□□□ -0.84
SMG5-204ENST00000476954 SRRQ9GZT4 340 aa9.79□□□□□ -0.84
SMG5-204ENST00000476954 GTSF1LQ9H1H1 148 aa9.79□□□□□ -0.84
SMG5-204ENST00000476954 RNF24Q9Y225 148 aa9.79□□□□□ -0.84
SMG5-204ENST00000476954 COX11Q9Y6N1 276 aa9.79□□□□□ -0.84
SMG5-204ENST00000476954 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 K7EPK0 472 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 COX7A2P2O60397 106 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 RAB2BQ8WUD1 216 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 SPXQ9BT56 116 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 EXTL2Q9UBQ6 330 aa9.78□□□□□ -0.84
SMG5-204ENST00000476954 TRAV8-1A0A0A6YYK1 113 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 A0A0D9SG52 128 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 ANKRD65E5RJM6 399 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 NDUFB4O95168 129 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 TOR2AQ5JU69 321 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 Q8TAT8 98 aa9.77□□□□□ -0.85
SMG5-204ENST00000476954 MRPL53Q96EL3 112 aaKnown RBP9.77□□□□□ -0.85
SMG5-204ENST00000476954 FABP12A6NFH5 140 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 GOSR2O14653 212 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 AGPAT2O15120 278 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 NMBP08949 121 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
SMG5-204ENST00000476954 VWC2Q2TAL6 325 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 PXDC1Q5TGL8 231 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 C10orf113Q5VZT2 155 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 EXOC3-AS1Q8N2X6 119 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 RMI2Q96E14 147 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 SOSTQ9BQB4 213 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
SMG5-204ENST00000476954 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 NCS1P62166 190 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 SRPXP78539 464 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 GUK1Q16774 197 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 LCE2AQ5TA79 106 aaPredicted RBP9.75□□□□□ -0.85
SMG5-204ENST00000476954 YIPF6Q96EC8 236 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 NPVFQ9HCQ7 196 aa9.75□□□□□ -0.85
SMG5-204ENST00000476954 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
SMG5-204ENST00000476954 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 ZNF253O75346 499 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 BAK1Q16611 211 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 FFAR4Q5NUL3 377 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 TMEM78Q5T7P6 136 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 ZNF546Q86UE3 836 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 CLVS1Q8IUQ0 354 aaPredicted RBP9.74□□□□□ -0.85
SMG5-204ENST00000476954 HSD17B11Q8NBQ5 300 aa9.74□□□□□ -0.85
SMG5-204ENST00000476954 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms