RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 MRPL20Q9BYC9 149 aaKnown RBP8.3□□□□□ -1.08
ABCF1-205ENST00000475993 SLC25A39Q9BZJ4 359 aaPredicted RBP8.3□□□□□ -1.08
ABCF1-205ENST00000475993 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 RPUSD1Q9UJJ7 312 aaKnown RBP8.3□□□□□ -1.08
ABCF1-205ENST00000475993 DSCAMO60469 2012 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 IGHG4P01861 327 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 LEPP41159 167 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 CCL11P51671 97 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 TWIST1Q15672 202 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
ABCF1-205ENST00000475993 LINC01619G3V211 115 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 ATP5LO75964 103 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 OOSP1A8MZH6 123 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 NPFFO15130 113 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 LHBP01229 141 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 IL4P05112 153 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCF1-205ENST00000475993 TMEM30BQ3MIR4 351 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 ANKRD29Q8N6D5 301 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 FOXC2Q99958 501 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 CELSR3Q9NYQ7 3312 aa8.29□□□□□ -1.08
ABCF1-205ENST00000475993 A8MWV9 139 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 DUX4L9Q6RFH8 374 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-205ENST00000475993 ASCL5Q7RTU5 278 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 ARFGEF3Q5TH69 2177 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 TRBV19A0A075B6N1 114 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 J3KT08 172 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-205ENST00000475993 SPRNQ5BIV9 151 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 PRR14LQ5THK1 2151 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 TRAV40A0A0B4J280 105 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 IGLV2-23P01705 113 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 CECR9P0C854 216 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-205ENST00000475993 OR4C13Q8NGP0 309 aa8.28□□□□□ -1.08
ABCF1-205ENST00000475993 SVILO95425 2214 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 Q6Q795 121 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
ABCF1-205ENST00000475993 TMEM160Q9NX00 188 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 NTN3O00634 580 aaPredicted RBP8.27□□□□□ -1.09
ABCF1-205ENST00000475993 FAM201AQ5SY85 155 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 HCP5Q6MZN7 132 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 C15orf53Q8NAA6 179 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 C17orf77Q96MU5 243 aa8.27□□□□□ -1.09
ABCF1-205ENST00000475993 KLK5Q9Y337 293 aaPredicted RBP8.27□□□□□ -1.09
ABCF1-205ENST00000475993 TM4SF5O14894 197 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 LYZP61626 148 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 HES1Q14469 280 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 Q6ZT83 130 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 LYPD1Q8N2G4 141 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
ABCF1-205ENST00000475993 SH2D1AO60880 128 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 ASIPP42127 132 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 LRRC75A-AS1Q8N1F1 130 aa8.26□□□□□ -1.09
ABCF1-205ENST00000475993 K7EM74 188 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 IGHV3-21A0A0B4J1V1 117 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 HERVK_113P63121 156 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 MSMPQ1L6U9 139 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 GAFA1Q96PS6 74 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 TPSG1Q9NRR2 321 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 SPRR3Q9UBC9 169 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 PROCRQ9UNN8 238 aa8.25□□□□□ -1.09
ABCF1-205ENST00000475993 NCBP2LA6PVI3 153 aaKnown RBP8.24□□□□□ -1.09
ABCF1-205ENST00000475993 IGLV1-44P01699 117 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 PRB4P10163 310 aaPredicted RBP8.24□□□□□ -1.09
ABCF1-205ENST00000475993 SRSF2Q01130 221 aaKnown RBP8.24□□□□□ -1.09
ABCF1-205ENST00000475993 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 INTS1Q8N201 2190 aaKnown RBP8.24□□□□□ -1.09
ABCF1-205ENST00000475993 PLXNB1O43157 2135 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 UBE2D3P61077 147 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 UBE2D2P62837 147 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 IGLV2-18A0A075B6J9 118 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 MYMXA0A1B0GTQ4 84 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 F8WDY8 70 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 SBSPONQ8IVN8 264 aa8.24□□□□□ -1.09
ABCF1-205ENST00000475993 M0R3E3 92 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 NDUFA7O95182 113 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 PLNP26678 52 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 GATA4P43694 442 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 ZNF575Q86XF7 245 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 SHANK2-AS3Q9BTD1 123 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms