RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 HTN3P15516 51 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 UBE2L3P68036 154 aaKnown RBP10.87□□□□□ -0.67
VARS-223ENST00000474643 PDE6HQ13956 83 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 SPINK13Q1W4C9 94 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 MBD3L1Q8WWY6 194 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 TRAV1-1A0A0B4J248 108 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 P0DMU3 169 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 TEX261Q6UWH6 196 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 SUN5Q8TC36 379 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 NEU1Q99519 415 aa10.86□□□□□ -0.67
VARS-223ENST00000474643 TEX46H3BTG2 121 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 EIF3GO75821 320 aaKnown RBP eCLIP10.85□□□□□ -0.67
VARS-223ENST00000474643 CXorf1O96002 111 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 INSP01308 110 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 IFNA7P01567 189 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 ICAM4Q14773 271 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 RRN3P1Q2M238 152 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 ZNF705AQ6ZN79 300 aaPredicted RBP10.85□□□□□ -0.67
VARS-223ENST00000474643 LYPD1Q8N2G4 141 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
VARS-223ENST00000474643 LOC102723971A0A1B0GUV8 181 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 A8MTW9 85 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 M0R3E3 92 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
VARS-223ENST00000474643 NDUFB4O95168 129 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 AMTNQ6UX39 209 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 FXYD5Q96DB9 178 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
VARS-223ENST00000474643 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 PLA2G2EQ9NZK7 142 aa10.84□□□□□ -0.67
VARS-223ENST00000474643 TRAV12-2A0A075B6T6 113 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 TSPOP30536 169 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 CSN1S1P47710 185 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 RANP62826 216 aaKnown RBP10.83□□□□□ -0.68
VARS-223ENST00000474643 BLOC1S1P78537 153 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 ZNF726P1Q15940 193 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 FAM222AQ5U5X8 452 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 ZNF680Q8NEM1 530 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
VARS-223ENST00000474643 J3KRW8 73 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 H2AFB1P0C5Y9 115 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 CDKN1BP46527 198 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 PPT1P50897 306 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 DAD1P61803 113 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
VARS-223ENST00000474643 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
VARS-223ENST00000474643 MAP1LC3B2A6NCE7 125 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 ARL14EPLP0DKL9 152 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 LEPP41159 167 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 ALKAL2Q6UX46 152 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 LINC01587Q99440 93 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 MAP1LC3BQ9GZQ8 125 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 Q9H3A6 140 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 DKK2Q9UBU2 259 aa10.81□□□□□ -0.68
VARS-223ENST00000474643 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
VARS-223ENST00000474643 NPIPB6E9PJ23 425 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 HTN1P15515 57 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 GCHFRP30047 84 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 FHITP49789 147 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 ERCC8Q13216 396 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 TMEM78Q5T7P6 136 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 CMTM2Q8TAZ6 248 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 FAM210BQ96KR6 192 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
VARS-223ENST00000474643 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
VARS-223ENST00000474643 M0R2N4 97 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 CRXO43186 299 aaPredicted RBP10.79□□□□□ -0.68
VARS-223ENST00000474643 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
VARS-223ENST00000474643 TAGLN2P37802 199 aaKnown RBP10.79□□□□□ -0.68
VARS-223ENST00000474643 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 SSX7Q7RTT5 188 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 TMEM256Q8N2U0 113 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 LINC00477Q96M19 166 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
VARS-223ENST00000474643 A0A1W2PRE2 83 aa10.78□□□□□ -0.68
VARS-223ENST00000474643 PGPA6NDG6 321 aa10.78□□□□□ -0.68
VARS-223ENST00000474643 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
VARS-223ENST00000474643 CT45A10P0DMU9 189 aa10.78□□□□□ -0.68
VARS-223ENST00000474643 RXFP4Q8TDU9 374 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms