RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PIGBOS1A0A0B4J2F0 54 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 SMCO3A2RU48 225 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 H3BTX0 84 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 K7EPK0 472 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 CTDSPLO15194 276 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 SPINK4O60575 86 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 GYPEP15421 78 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 ANXA7P20073 488 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 EVI2AP22794 236 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 LEPP41159 167 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 CRYBA4P53673 196 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 TCL1AP56279 114 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 SELENOTP62341 195 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 MRPL23Q16540 153 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 BAK1Q16611 211 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 CTF1Q16619 201 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 ANXA2RQ3ZCQ2 193 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 WDR73Q6P4I2 378 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 Q6ZSA8 131 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 S100A7AQ86SG5 101 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 LRTM2Q8N967 370 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 NTN5Q8WTR8 489 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 SCGB3A2Q96PL1 93 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 VGLL1Q99990 258 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 NAA50Q9GZZ1 169 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 ARL6Q9H0F7 186 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 ARV1Q9H2C2 271 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 PRO0255Q9UI72 69 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 SCP2D1Q9UJQ7 156 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 KLF12Q9Y4X4 402 aa3.44□□□□□ -1.86
SNRNP40-204ENST00000474025 C7orf71A4D174 169 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 KLLNB2CW77 178 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 H3BQ15 152 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 K7EQD1 137 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 CTDSP2O14595 271 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 RGS5O15539 181 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 PRAF2O60831 178 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 CCNKO75909 580 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 C1QBP02746 253 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 SLC25A5P05141 298 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 CRYGDP07320 174 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 IGLC2P0DOY2 106 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 RRAS2P62070 204 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 CD300CQ08708 224 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 SLC38A11Q08AI6 406 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 SLAQ13239 276 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 BTN1A1Q13410 526 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 IL18Q14116 193 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 FHL2Q14192 279 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 TMEM128Q5BJH2 165 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 MORN5Q5VZ52 161 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 NEGR1Q7Z3B1 354 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 LINC00305Q7Z4B0 112 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 BPIFA4PQ86YQ2 179 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 EIF4E3Q8N5X7 224 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 Q8N814 137 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 SAT2Q96F10 170 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 C8orf49Q96NF6 230 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 SPXQ9BT56 116 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 MCUBQ9NWR8 336 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 MRPL16Q9NX20 251 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 HHLA3Q9XRX5 114 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 PXMP4Q9Y6I8 212 aa3.43□□□□□ -1.86
SNRNP40-204ENST00000474025 E5RGE8 158 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 HOXB5P09067 269 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 SRIP30626 198 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 POLR2GP62487 172 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 OPCMLQ14982 345 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 IBA57Q5T440 356 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 PXDC1Q5TGL8 231 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 C10orf126Q8N4M7 172 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 TMEM37Q8WXS4 190 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 FAM19A4Q96LR4 140 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 FAM210AQ96ND0 272 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 MRPL32Q9BYC8 188 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 NPVFQ9HCQ7 196 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 TP53TG3Q9ULZ0 132 aa3.42□□□□□ -1.86
SNRNP40-204ENST00000474025 M0R3E3 92 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 GOSR2O14653 212 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 AGPAT2O15120 278 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 PSCAO43653 123 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 SSSCA1O60232 199 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 COX7A2P2O60397 106 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 ZNF253O75346 499 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 MPDU1O75352 247 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 SFT2D2O95562 160 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 OR4E1P0C645 316 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 SFTA3P0C7M3 94 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 METTL15P1P0C7V9 234 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 CRISP2P16562 243 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 ERCC8Q13216 396 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 PPP1R1AQ13522 171 aa3.41□□□□□ -1.86
SNRNP40-204ENST00000474025 GUK1Q16774 197 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms